RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 SCRT1Q9BWW7 348 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 SPATC1LQ9H0A9 340 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 CST9LQ9H4G1 147 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 CXXC1Q9P0U4 656 aaPredicted RBP9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 ADAM29Q9UKF5 820 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 IKZF2Q9UKS7 526 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 FARSAQ9Y285 508 aaKnown RBP9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 TRIP11Q15643 1979 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 ZSWIM8A7E2V4 1837 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 BLACEA4D250 179 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 M0QZ24 198 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 IGHA1P01876 353 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 SLC35G6P0C7Q6 338 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 GNRHRP30968 328 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 UBE2MP61081 183 aaKnown RBP9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 CDK5Q00535 292 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 TIAL1Q01085 375 aaKnown RBP eCLIP9.42□□□□□ -0.98e-6■■■□□ 19.2
PRPF4B-206ENST00000481109 RPE65Q16518 533 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 FRRS1Q6ZNA5 592 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 TAS1R1Q7RTX1 841 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 GKN2Q86XP6 184 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 GALNT16Q8N428 558 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 ACOT4Q8N9L9 421 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 OR4K17Q8NGC6 315 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 OR5L1Q8NGL2 311 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 OR13C4Q8NGS5 318 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 HASPINQ8TF76 798 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 PPP1R1CQ8WVI7 109 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 HMGB4Q8WW32 186 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 CMKLR1Q99788 373 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 PDCD2LQ9BRP1 358 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 ZNF649Q9BS31 505 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 HIPK2Q9H2X6 1198 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 TAS2R8Q9NYW2 309 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 ZNF230Q9UIE0 474 aaPredicted RBP9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 GXYLT2A0PJZ3 443 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 CTSVO60911 334 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 NDUFS3O75489 264 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 PDGFBP01127 241 aaPredicted RBP9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 OR12D1P0DN82 309 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 FCARP24071 287 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 CDKN1CP49918 316 aaPredicted RBP9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 MTSS1LQ765P7 747 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 D2HGDHQ8N465 521 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 ZNF738Q8NE65 137 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 OR51F2Q8NH61 342 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 DNASE2BQ8WZ79 361 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 TMEM18Q96B42 140 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 GPR21Q99679 349 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 SLC35A5Q9BS91 424 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 MRIQ9BWK5 157 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 SLC35B3Q9H1N7 401 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 MFSD1Q9H3U5 465 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 TVP23BQ9NYZ1 205 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 RNF150Q9ULK6 438 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 INSL6Q9Y581 213 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 A0A1B0GW64 132 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 YDJCA8MPS7 323 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 GABRDO14764 452 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 DNAJB6O75190 326 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 TNFSF13O75888 250 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 TRBC1P01850 177 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 C1QCP02747 245 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 SNCAP37840 140 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 COMPP49747 757 aaPredicted RBP9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 BACE1P56817 501 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 ERVFRD-1P60508 538 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 ERVS71-1P61550 626 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 RPS14P62263 151 aaKnown RBP9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 BSXQ3C1V8 233 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 PODNL1Q6PEZ8 512 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 ZNF322Q6U7Q0 402 aaPredicted RBP9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 CD300LDQ6UXZ3 194 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 Q6ZVU0 165 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 OR4D5Q8NGN0 318 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 SNIP1Q8TAD8 396 aaKnown RBP9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 TMEM159Q96B96 161 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 NKX3-1Q99801 234 aaPredicted RBP9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 KLHDC3Q9BQ90 382 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 MS4A8Q9BY19 250 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 P2RY12Q9H244 342 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 CNTD2Q9H8S5 307 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 KCNJ16Q9NPI9 418 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 UPB1Q9UBR1 384 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 KLK11Q9UBX7 282 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 IL20RAQ9UHF4 553 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 ANGPT4Q9Y264 503 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 ST3GAL6Q9Y274 331 aa9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 EXOGQ9Y2C4 368 aaKnown RBP9.41□□□□□ -0.9
PRPF4B-206ENST00000481109 TVP23AA6NH52 213 aa9.4□□□□□ -0.9
PRPF4B-206ENST00000481109 MAGEB17A8MXT2 336 aa9.4□□□□□ -0.9
PRPF4B-206ENST00000481109 PRAMEF26H0Y7S4 382 aa9.4□□□□□ -0.9
PRPF4B-206ENST00000481109 H3BN98 237 aa9.4□□□□□ -0.9
PRPF4B-206ENST00000481109 AQP7O14520 342 aa9.4□□□□□ -0.9
PRPF4B-206ENST00000481109 CDIPTO14735 213 aa9.4□□□□□ -0.9
PRPF4B-206ENST00000481109 ZNF208O43345 1280 aa9.4□□□□□ -0.9
PRPF4B-206ENST00000481109 DCNP07585 359 aaKnown RBP9.4□□□□□ -0.9
PRPF4B-206ENST00000481109 OR5H8P0DN80 308 aa9.4□□□□□ -0.9
PRPF4B-206ENST00000481109 SNRPBP14678 240 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms