RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 ALKBH2Q6NS38 261 aa10.67□□□□□ -0.7
TRA2B-212ENST00000480461 LYPD4Q6UWN0 246 aa10.67□□□□□ -0.7
TRA2B-212ENST00000480461 ZNF813Q6ZN06 617 aa10.67□□□□□ -0.7
TRA2B-212ENST00000480461 BCDIN3DQ7Z5W3 292 aaKnown RBP10.67□□□□□ -0.7
TRA2B-212ENST00000480461 TMEM200AQ86VY9 491 aa10.67□□□□□ -0.7
TRA2B-212ENST00000480461 C1orf162Q8NEQ5 155 aaPredicted RBP10.67□□□□□ -0.7
TRA2B-212ENST00000480461 OR51L1Q8NGJ5 315 aa10.67□□□□□ -0.7
TRA2B-212ENST00000480461 OR9Q1Q8NGQ5 310 aa10.67□□□□□ -0.7
TRA2B-212ENST00000480461 HSD17B8Q92506 261 aa10.67□□□□□ -0.7
TRA2B-212ENST00000480461 FBXO17Q96EF6 278 aa10.67□□□□□ -0.7
TRA2B-212ENST00000480461 LRRC46Q96FV0 321 aa10.67□□□□□ -0.7
TRA2B-212ENST00000480461 DACH2Q96NX9 599 aa10.67□□□□□ -0.7
TRA2B-212ENST00000480461 SNX18Q96RF0 628 aa10.67□□□□□ -0.7
TRA2B-212ENST00000480461 RIBC2Q9H4K1 309 aa10.67□□□□□ -0.7
TRA2B-212ENST00000480461 RERGLQ9H628 205 aa10.67□□□□□ -0.7
TRA2B-212ENST00000480461 HINT3Q9NQE9 182 aaKnown RBP10.67□□□□□ -0.7
TRA2B-212ENST00000480461 TVP23BQ9NYZ1 205 aa10.67□□□□□ -0.7
TRA2B-212ENST00000480461 DPRXA6NFQ7 191 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 DEFB108AA8MXU0 73 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 H0YHG0 523 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 KHDRBS3O75525 346 aaKnown RBP10.66□□□□□ -0.7
TRA2B-212ENST00000480461 ATP6V1G2O95670 118 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 HMGN1P05114 100 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 PSKH1P11801 424 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 LAP3P28838 519 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 SH3BGRP55822 239 aaPredicted RBP10.66□□□□□ -0.7
TRA2B-212ENST00000480461 PIGFQ07326 219 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 ENDOGQ14249 297 aaKnown RBP10.66□□□□□ -0.7
TRA2B-212ENST00000480461 DAZAP2Q15038 168 aaPredicted RBP10.66□□□□□ -0.7
TRA2B-212ENST00000480461 SGCAQ16586 387 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 MEP1BQ16820 701 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 LINC01590Q5TEZ4 76 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 FAM27BQ5VT28 67 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 B3GLCTQ6Y288 498 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 P2RY8Q86VZ1 359 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 JAZF1Q86VZ6 243 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 CPOQ8IVL8 374 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 LRRC18Q8N456 261 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 BBS1Q8NFJ9 593 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 FNDC8Q8TC99 324 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 FAM222BQ8WU58 562 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 MED18Q9BUE0 208 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 SEC61A2Q9H9S3 476 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 SIAEQ9HAT2 523 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 EMC7Q9NPA0 242 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 FAM118AQ9NWS6 357 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 AASSQ9UDR5 926 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 NDRG3Q9UGV2 375 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 KLHL21Q9UJP4 597 aa10.66□□□□□ -0.7
TRA2B-212ENST00000480461 ABCA4P78363 2273 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 ARPC4-TTLL3A0A0A6YYG9 625 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 A0A1W2PPR1 153 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 RIIAD1A6NNX1 92 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 RENP00797 406 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 CELA3BP08861 270 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 MMP7P09237 267 aaPredicted RBP10.65□□□□□ -0.7
TRA2B-212ENST00000480461 OR8G3PP0DMU2 310 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 GAAP10253 952 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 HOXB1P14653 301 aaPredicted RBP10.65□□□□□ -0.7
TRA2B-212ENST00000480461 PPP3CBP16298 524 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 SPI1P17947 270 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 CRYGSP22914 178 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 ZNF84P51523 738 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 SLC25A1P53007 311 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 PPA1Q15181 289 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 SNAPC1Q16533 368 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 KCNMB1Q16558 191 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 PLBD1Q6P4A8 553 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 MYPOPQ86VE0 399 aaPredicted RBP10.65□□□□□ -0.7
TRA2B-212ENST00000480461 WFDC8Q8IUA0 241 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 GLB1L2Q8IW92 636 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 C17orf78Q8N4C9 275 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 ZNF511Q8NB15 262 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 SLC26A10Q8NG04 563 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 NANOS1Q8WY41 292 aaKnown RBP10.65□□□□□ -0.7
TRA2B-212ENST00000480461 C11orf40Q8WZ69 217 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 NINJ1Q92982 152 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 HRASLS5Q96KN8 279 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 IL4I1Q96RQ9 567 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 POLE4Q9NR33 117 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 MRPL22Q9NWU5 206 aaKnown RBP10.65□□□□□ -0.7
TRA2B-212ENST00000480461 ZNF226Q9NYT6 803 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 NDRG4Q9ULP0 352 aaKnown RBP10.65□□□□□ -0.7
TRA2B-212ENST00000480461 FKBP7Q9Y680 259 aa10.65□□□□□ -0.7
TRA2B-212ENST00000480461 A0A1W2PPL8 197 aa10.64□□□□□ -0.71
TRA2B-212ENST00000480461 TLX2O43763 284 aaPredicted RBP10.64□□□□□ -0.71
TRA2B-212ENST00000480461 SLC2A5P22732 501 aa10.64□□□□□ -0.71
TRA2B-212ENST00000480461 CRABP1P29762 137 aa10.64□□□□□ -0.71
TRA2B-212ENST00000480461 GGT2P36268 569 aa10.64□□□□□ -0.71
TRA2B-212ENST00000480461 ZNF83P51522 516 aa10.64□□□□□ -0.71
TRA2B-212ENST00000480461 RAD23AP54725 363 aa10.64□□□□□ -0.71
TRA2B-212ENST00000480461 HSF2Q03933 536 aa10.64□□□□□ -0.71
TRA2B-212ENST00000480461 NRN1LQ496H8 165 aa10.64□□□□□ -0.71
TRA2B-212ENST00000480461 AADACL4Q5VUY2 407 aa10.64□□□□□ -0.71
TRA2B-212ENST00000480461 MDP1Q86V88 176 aa10.64□□□□□ -0.71
TRA2B-212ENST00000480461 ZNF584Q8IVC4 421 aa10.64□□□□□ -0.71
TRA2B-212ENST00000480461 TCEANCQ8N8B7 351 aa10.64□□□□□ -0.71
TRA2B-212ENST00000480461 HS3ST6Q96QI5 342 aa10.64□□□□□ -0.71
TRA2B-212ENST00000480461 USB1Q9BQ65 265 aaKnown RBP10.64□□□□□ -0.71
TRA2B-212ENST00000480461 ZNF416Q9BWM5 594 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms