RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 VIPAS39Q9H9C1 493 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 SIAEQ9HAT2 523 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 ELOVL3Q9HB03 270 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 SLC52A3Q9NQ40 469 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 FGFR1OP2Q9NVK5 253 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 B3GNT2Q9NY97 397 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 TAS2R5Q9NYW4 299 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 GRHPRQ9UBQ7 328 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 AP3M1Q9Y2T2 418 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 WNK2Q9Y3S1 2297 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 TRAV27A0A087WT01 109 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 A0A0G2JMP0 313 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 A0A0X1KG70 313 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 TMEM129A0AVI4 362 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 ELOVL7A1L3X0 281 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 C12orf71A8MTZ7 269 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 C17orf100A8MU93 164 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 TRMUO75648 421 aaKnown RBP6.06□□□□□ -1.44
COL17A1-205ENST00000480127 MPZL1O95297 269 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 ASAH2BP0C7U1 165 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 HOXB9P17482 250 aaPredicted RBP6.06□□□□□ -1.44
COL17A1-205ENST00000480127 COL8A2P25067 703 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 MAGEB1P43366 347 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 UGT2B15P54855 530 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 CTXN1P60606 82 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 ERVS71-1P61550 626 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 KLF10Q13118 480 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 LAPTM4AQ15012 233 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 TRAM2Q15035 370 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 PDLIM3Q53GG5 364 aaPredicted RBP6.06□□□□□ -1.44
COL17A1-205ENST00000480127 FGD3Q5JSP0 725 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 ELFN2Q5R3F8 820 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 PRR31Q5SQ13 230 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 THEM4Q5T1C6 240 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 DCAF12L2Q5VW00 463 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 FAM205BPQ63HN1 556 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 WDR88Q6ZMY6 472 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF627Q7L945 461 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 IGFN1Q86VF2 1251 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 NKAIN4Q8IVV8 208 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 POU5F2Q8N7G0 328 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 OR4M2Q8NGB6 313 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 MOSPD2Q8NHP6 518 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 CLDND2Q8NHS1 167 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 GEMIN6Q8WXD5 167 aaKnown RBP6.06□□□□□ -1.44
COL17A1-205ENST00000480127 ASB10Q8WXI3 467 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 RCN3Q96D15 328 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 KCTD14Q9BQ13 255 aaPredicted RBP6.06□□□□□ -1.44
COL17A1-205ENST00000480127 NSRP1Q9H0G5 558 aaKnown RBP6.06□□□□□ -1.44
COL17A1-205ENST00000480127 TXNIPQ9H3M7 391 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 CYSLTR2Q9NS75 346 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 MYEF2Q9P2K5 600 aaKnown RBP6.06□□□□□ -1.44
COL17A1-205ENST00000480127 RHCGQ9UBD6 479 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 AURKCQ9UQB9 309 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 TIMM10BQ9Y5J6 103 aa6.06□□□□□ -1.44
COL17A1-205ENST00000480127 TRAV20A0A0B4J274 112 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 FAM220BPB1ANY3 271 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 CENPBD1B2RD01 187 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 H7C1C5 153 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 NDUFAB1O14561 156 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 SURF4O15260 269 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 MGRN1O60291 552 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 PIP5K1CO60331 668 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 DOK2O60496 412 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 CCDC22O60826 627 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 SNAP29O95721 258 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 PNPP00491 289 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 GAAP10253 952 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 THRBP10828 461 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF32P17041 273 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 EPHA1P21709 976 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 MSR1P21757 451 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 FPR2P25090 351 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 LAP3P28838 519 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 NOS3P29474 1203 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 KDELR2P33947 212 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 LIPAP38571 399 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 HTR5AP47898 357 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 SLC9A3P48764 834 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 HILS1P60008 231 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 RPL27P61353 136 aaKnown RBP6.05□□□□□ -1.44
COL17A1-205ENST00000480127 PPP1CBP62140 327 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 LCN6P62502 163 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 MRPS11P82912 194 aaKnown RBP6.05□□□□□ -1.44
COL17A1-205ENST00000480127 MRPS34P82930 218 aaKnown RBP6.05□□□□□ -1.44
COL17A1-205ENST00000480127 TNFAIP6P98066 277 aaPredicted RBP6.05□□□□□ -1.44
COL17A1-205ENST00000480127 FMODQ06828 376 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 SCRN3Q0VDG4 424 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 NRN1LQ496H8 165 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 IFI44LQ53G44 452 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 AWAT1Q58HT5 328 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 COQ5Q5HYK3 327 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 LRFN4Q6PJG9 635 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 C1orf229Q6ZS94 237 aaPredicted RBP6.05□□□□□ -1.44
COL17A1-205ENST00000480127 USP43Q70EL4 1123 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 CCDC80Q76M96 950 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 JAZF1Q86VZ6 243 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 NRMQ8IXM6 262 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 C1orf174Q8IYL3 243 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 KLHL36Q8N4N3 616 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms