RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 CA10Q9NS85 328 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 LAMP3Q9UQV4 416 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 C12orf71A8MTZ7 269 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 SOCS2O14508 198 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 ICMTO60725 284 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 PPP1R3DO95685 299 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 COX5BP10606 129 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 FCGR1AP12314 374 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 NR4A1P22736 598 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 LAP3P28838 519 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 PCSK6P29122 969 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 CALCRP30988 508 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 EVX1P49640 407 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 FABP6P51161 128 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 HGFACQ04756 655 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 PLP2Q04941 152 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 PIGFQ07326 219 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 SHQ1Q6PI26 577 aaKnown RBP13.4□□□□□ -0.26
C9orf3-217ENST00000479161 PTCHD4Q6ZW05 846 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 YTHDF3Q7Z739 585 aaKnown RBP13.4□□□□□ -0.26
C9orf3-217ENST00000479161 ZBTB46Q86UZ6 589 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 C10orf67Q8IYJ2 551 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 FGFBP3Q8TAT2 258 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 NSMAFQ92636 917 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 TRMT61AQ96FX7 289 aaKnown RBP13.4□□□□□ -0.26
C9orf3-217ENST00000479161 DDOQ99489 341 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 IFT27Q9BW83 186 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 SYT4Q9H2B2 425 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 IL20RAQ9UHF4 553 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 TIMM10BQ9Y5J6 103 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 FKBP7Q9Y680 259 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 ATP23Q9Y6H3 246 aa13.4□□□□□ -0.26
C9orf3-217ENST00000479161 VPS13CQ709C8 3753 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 IQCMA0A1B0GVH7 501 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 H7C417 338 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 CIB2O75838 187 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 RENP00797 406 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 TP53P04637 393 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-217ENST00000479161 CELA3BP08861 270 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 HIST1H1CP16403 213 aaKnown RBP13.39□□□□□ -0.27
C9orf3-217ENST00000479161 CTLA4P16410 223 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 NOS3P29474 1203 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 CDAP32320 146 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 GLRXP35754 106 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 PTH2RP49190 550 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 NPRL3Q12980 569 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 SGCAQ16586 387 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 SWI5Q1ZZU3 235 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 ZNF362Q5T0B9 420 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-217ENST00000479161 MYPOPQ86VE0 399 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-217ENST00000479161 ALDH16A1Q8IZ83 802 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 NPEPL1Q8NDH3 523 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 OR2T33Q8NG76 320 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 FBXO17Q96EF6 278 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 BDH2Q9BUT1 245 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 NUAK2Q9H093 628 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 RNF121Q9H920 327 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 NTN4Q9HB63 628 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 CCNB1IP1Q9NPC3 277 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 ATPIF1Q9UII2 106 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 ITGB1BP2Q9UKP3 347 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 AP4S1Q9Y587 144 aa13.39□□□□□ -0.27
C9orf3-217ENST00000479161 FLNAP21333 2647 aaKnown RBP13.38□□□□□ -0.27
C9orf3-217ENST00000479161 IGLV1-36A0A0B4J1U3 117 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 B9A039 149 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 SLC16A7O60669 478 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 E2F6O75461 281 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 ZNF32P17041 273 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 SERPINF1P36955 418 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 ACTR3P61158 418 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 RPS23P62266 143 aaKnown RBP13.38□□□□□ -0.27
C9orf3-217ENST00000479161 ADAM8P78325 824 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 GLO1Q04760 184 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 PPP1R8Q12972 351 aaKnown RBP13.38□□□□□ -0.27
C9orf3-217ENST00000479161 ENDOGQ14249 297 aaKnown RBP13.38□□□□□ -0.27
C9orf3-217ENST00000479161 RAB39AQ14964 217 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 ATP6AP1Q15904 470 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 UNQ6126/PRO20091Q6UXV3 157 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 TMEM179BQ7Z7N9 219 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 JAZF1Q86VZ6 243 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 TGIF2LYQ8IUE0 185 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 LRRC18Q8N456 261 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 SLC30A7Q8NEW0 376 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 MS4A3Q96HJ5 214 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 OSBPL10Q9BXB5 764 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 EGLN3Q9H6Z9 239 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 SEC61A2Q9H9S3 476 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 ZNF556Q9HAH1 456 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 BARX1Q9HBU1 254 aaPredicted RBP13.38□□□□□ -0.27
C9orf3-217ENST00000479161 PDP1Q9P0J1 537 aaPredicted RBP13.38□□□□□ -0.27
C9orf3-217ENST00000479161 REV1Q9UBZ9 1251 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 KLHL21Q9UJP4 597 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 B9D1Q9UPM9 204 aa13.38□□□□□ -0.27
C9orf3-217ENST00000479161 ZNF469Q96JG9 3925 aaPredicted RBP13.38□□□□□ -0.27
C9orf3-217ENST00000479161 C2CD3Q4AC94 2353 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 H7C1C5 153 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 PATE4P0C8F1 98 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 TUBG1P23258 451 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 FASP25445 335 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 CENPAP49450 140 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms