RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 WACQ9BTA9 647 aa17.78■□□□□ 0.44
VARS-224ENST00000479051 PLA2G12AQ9BZM1 189 aa17.78■□□□□ 0.44
VARS-224ENST00000479051 NUAK2Q9H093 628 aa17.78■□□□□ 0.44
VARS-224ENST00000479051 POLE4Q9NR33 117 aa17.78■□□□□ 0.44
VARS-224ENST00000479051 IGHV2OR16-5A0A0B4J2B6 119 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 BHLHE40O14503 412 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 CALCRP30988 508 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 APOBEC3AP31941 199 aaPredicted RBP17.77■□□□□ 0.44
VARS-224ENST00000479051 TTKP33981 857 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 CENPAP49450 140 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 GALK2Q01415 458 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.77■□□□□ 0.44
VARS-224ENST00000479051 ETFDHQ16134 617 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 PGGHGQ32M88 737 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 SLC35F1Q5T1Q4 408 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 B3GLCTQ6Y288 498 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 MYPOPQ86VE0 399 aaPredicted RBP17.77■□□□□ 0.44
VARS-224ENST00000479051 HIPK1Q86Z02 1210 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 MUC15Q8N387 334 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 LNX2Q8N448 690 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 SDR9C7Q8NEX9 313 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 NUP37Q8NFH4 326 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 OR52E2Q8NGJ4 325 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 OR8D4Q8NGM9 314 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 OR5K1Q8NHB7 308 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 FGFBP3Q8TAT2 258 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 MS4A3Q96HJ5 214 aa17.77■□□□□ 0.44
VARS-224ENST00000479051 COA3Q9Y2R0 106 aaPredicted RBP17.77■□□□□ 0.44
VARS-224ENST00000479051 CCDC168Q8NDH2 2452 aa17.77■□□□□ 0.43
VARS-224ENST00000479051 IFNGP01579 166 aa17.76■□□□□ 0.43
VARS-224ENST00000479051 SOD3P08294 240 aa17.76■□□□□ 0.43
VARS-224ENST00000479051 MMP7P09237 267 aaPredicted RBP17.76■□□□□ 0.43
VARS-224ENST00000479051 BMP4P12644 408 aa17.76■□□□□ 0.43
VARS-224ENST00000479051 ACTR3P61158 418 aa17.76■□□□□ 0.43
VARS-224ENST00000479051 TBC1D28Q2M2D7 210 aa17.76■□□□□ 0.43
VARS-224ENST00000479051 SLC36A3Q495N2 470 aa17.76■□□□□ 0.43
VARS-224ENST00000479051 YTHDF3Q7Z739 585 aaKnown RBP17.76■□□□□ 0.43
VARS-224ENST00000479051 SYT9Q86SS6 491 aa17.76■□□□□ 0.43
VARS-224ENST00000479051 DTX2Q86UW9 622 aa17.76■□□□□ 0.43
VARS-224ENST00000479051 ALDH16A1Q8IZ83 802 aa17.76■□□□□ 0.43
VARS-224ENST00000479051 HS3ST5Q8IZT8 346 aa17.76■□□□□ 0.43
VARS-224ENST00000479051 LRRC75A-AS1Q8N1F1 130 aa17.76■□□□□ 0.43
VARS-224ENST00000479051 SLC30A7Q8NEW0 376 aa17.76■□□□□ 0.43
VARS-224ENST00000479051 GRIP2Q9C0E4 1043 aa17.76■□□□□ 0.43
VARS-224ENST00000479051 NTN4Q9HB63 628 aa17.76■□□□□ 0.43
VARS-224ENST00000479051 CDH20Q9HBT6 801 aa17.76■□□□□ 0.43
VARS-224ENST00000479051 CA10Q9NS85 328 aa17.76■□□□□ 0.43
VARS-224ENST00000479051 KLHL21Q9UJP4 597 aa17.76■□□□□ 0.43
VARS-224ENST00000479051 TIMM10BQ9Y5J6 103 aa17.76■□□□□ 0.43
VARS-224ENST00000479051 FKBP7Q9Y680 259 aa17.76■□□□□ 0.43
VARS-224ENST00000479051 ZNF32P17041 273 aa17.75■□□□□ 0.43
VARS-224ENST00000479051 APLNRP35414 380 aa17.75■□□□□ 0.43
VARS-224ENST00000479051 GLO1Q04760 184 aa17.75■□□□□ 0.43
VARS-224ENST00000479051 DAG1Q14118 895 aa17.75■□□□□ 0.43
VARS-224ENST00000479051 KPNB1Q14974 876 aaKnown RBP17.75■□□□□ 0.43
VARS-224ENST00000479051 PABPC1L2AQ5JQF8 200 aa17.75■□□□□ 0.43
VARS-224ENST00000479051 ZFP1Q6P2D0 407 aa17.75■□□□□ 0.43
VARS-224ENST00000479051 IGFBPL1Q8WX77 278 aa17.75■□□□□ 0.43
VARS-224ENST00000479051 FBXO17Q96EF6 278 aa17.75■□□□□ 0.43
VARS-224ENST00000479051 TRMT61AQ96FX7 289 aaKnown RBP17.75■□□□□ 0.43
VARS-224ENST00000479051 TRAF4Q9BUZ4 470 aaPredicted RBP17.75■□□□□ 0.43
VARS-224ENST00000479051 ZNF416Q9BWM5 594 aa17.75■□□□□ 0.43
VARS-224ENST00000479051 TEX12Q9BXU0 123 aa17.75■□□□□ 0.43
VARS-224ENST00000479051 RACGAP1Q9H0H5 632 aa17.75■□□□□ 0.43
VARS-224ENST00000479051 CXXC4Q9H2H0 198 aa17.75■□□□□ 0.43
VARS-224ENST00000479051 SRA1Q9HD15 236 aaKnown RBP17.75■□□□□ 0.43
VARS-224ENST00000479051 RPRD1BQ9NQG5 326 aaKnown RBP17.75■□□□□ 0.43
VARS-224ENST00000479051 CBLN4Q9NTU7 201 aa17.75■□□□□ 0.43
VARS-224ENST00000479051 B9D1Q9UPM9 204 aa17.75■□□□□ 0.43
VARS-224ENST00000479051 POLR1DQ9Y2S0 133 aa17.75■□□□□ 0.43
VARS-224ENST00000479051 RIIAD1A6NNX1 92 aa17.74■□□□□ 0.43
VARS-224ENST00000479051 G3V2T6 193 aa17.74■□□□□ 0.43
VARS-224ENST00000479051 IGFBP1P08833 259 aaPredicted RBP17.74■□□□□ 0.43
VARS-224ENST00000479051 ZNF35P13682 527 aa17.74■□□□□ 0.43
VARS-224ENST00000479051 OSMP13725 252 aa17.74■□□□□ 0.43
VARS-224ENST00000479051 ZNF23P17027 643 aa17.74■□□□□ 0.43
VARS-224ENST00000479051 PRKACGP22612 351 aa17.74■□□□□ 0.43
VARS-224ENST00000479051 POU1F1P28069 291 aa17.74■□□□□ 0.43
VARS-224ENST00000479051 RPS23P62266 143 aaKnown RBP17.74■□□□□ 0.43
VARS-224ENST00000479051 LSM6P62312 80 aaKnown RBP17.74■□□□□ 0.43
VARS-224ENST00000479051 SCRN3Q0VDG4 424 aa17.74■□□□□ 0.43
VARS-224ENST00000479051 SNTB2Q13425 540 aaKnown RBP17.74■□□□□ 0.43
VARS-224ENST00000479051 KRT80Q6KB66 452 aa17.74■□□□□ 0.43
VARS-224ENST00000479051 VHLLQ6RSH7 139 aa17.74■□□□□ 0.43
VARS-224ENST00000479051 ZDHHC13Q8IUH4 622 aa17.74■□□□□ 0.43
VARS-224ENST00000479051 ZNF584Q8IVC4 421 aa17.74■□□□□ 0.43
VARS-224ENST00000479051 SVOPLQ8N434 492 aa17.74■□□□□ 0.43
VARS-224ENST00000479051 OR2T4Q8NH00 348 aa17.74■□□□□ 0.43
VARS-224ENST00000479051 FOXN4Q96NZ1 517 aa17.74■□□□□ 0.43
VARS-224ENST00000479051 GSX2Q9BZM3 304 aa17.74■□□□□ 0.43
VARS-224ENST00000479051 ZNF442Q9H7R0 627 aa17.74■□□□□ 0.43
VARS-224ENST00000479051 EMC7Q9NPA0 242 aa17.74■□□□□ 0.43
VARS-224ENST00000479051 CSMD2Q7Z408 3487 aa17.74■□□□□ 0.43
VARS-224ENST00000479051 MYO9AB2RTY4 2548 aa17.73■□□□□ 0.43
VARS-224ENST00000479051 OR6C68A6NDL8 312 aa17.73■□□□□ 0.43
VARS-224ENST00000479051 TP53P04637 393 aaPredicted RBP17.73■□□□□ 0.43
VARS-224ENST00000479051 ZNF3P17036 446 aa17.73■□□□□ 0.43
VARS-224ENST00000479051 NR4A1P22736 598 aa17.73■□□□□ 0.43
VARS-224ENST00000479051 GRK5P34947 590 aa17.73■□□□□ 0.43
VARS-224ENST00000479051 HGFACQ04756 655 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms