RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 LCN2P80188 198 aa11.25□□□□□ -0.61
VCL-205ENST00000478896 TAF11Q15544 211 aa11.25□□□□□ -0.61
VCL-205ENST00000478896 ZMAT1Q5H9K5 638 aa11.25□□□□□ -0.61
VCL-205ENST00000478896 MOSPD2Q8NHP6 518 aa11.25□□□□□ -0.61
VCL-205ENST00000478896 ABHD4Q8TB40 342 aa11.25□□□□□ -0.61
VCL-205ENST00000478896 C22orf15Q8WYQ4 148 aa11.25□□□□□ -0.61
VCL-205ENST00000478896 HDAC2Q92769 488 aaKnown RBP11.25□□□□□ -0.61
VCL-205ENST00000478896 POM121L2Q96KW2 1035 aa11.25□□□□□ -0.61
VCL-205ENST00000478896 ATP6V1G3Q96LB4 118 aa11.25□□□□□ -0.61
VCL-205ENST00000478896 SEPHS2Q99611 448 aa11.25□□□□□ -0.61
VCL-205ENST00000478896 OR2J1Q9GZK6 312 aa11.25□□□□□ -0.61
VCL-205ENST00000478896 POLR2J2Q9GZM3 115 aaKnown RBP11.25□□□□□ -0.61
VCL-205ENST00000478896 POLR2J3Q9H1A7 115 aaKnown RBP11.25□□□□□ -0.61
VCL-205ENST00000478896 SMURF2Q9HAU4 748 aa11.25□□□□□ -0.61
VCL-205ENST00000478896 CYSLTR2Q9NS75 346 aa11.25□□□□□ -0.61
VCL-205ENST00000478896 C20orf141Q9NUB4 165 aa11.25□□□□□ -0.61
VCL-205ENST00000478896 INTS9Q9NV88 658 aaKnown RBP11.25□□□□□ -0.61
VCL-205ENST00000478896 CGGBP1Q9UFW8 167 aaPredicted RBP11.25□□□□□ -0.61
VCL-205ENST00000478896 BAG5Q9UL15 447 aa11.25□□□□□ -0.61
VCL-205ENST00000478896 MED31Q9Y3C7 131 aa11.25□□□□□ -0.61
VCL-205ENST00000478896 IGKV1D-43A0A0B4J1Z2 117 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 ZSCAN5BA6NJL1 495 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 PRSS23O95084 383 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 OR5F1O95221 314 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 FPR2P25090 351 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 LIPAP38571 399 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 MMP15P51511 669 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 ARHGDIAP52565 204 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 ZNF133P52736 654 aaPredicted RBP11.24□□□□□ -0.61
VCL-205ENST00000478896 PPP1CBP62140 327 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 PSG4Q00888 419 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 PIN1Q13526 163 aaPredicted RBP11.24□□□□□ -0.61
VCL-205ENST00000478896 CYLC2Q14093 348 aaPredicted RBP11.24□□□□□ -0.61
VCL-205ENST00000478896 ALG10Q5BKT4 473 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 ARMC4Q5T2S8 1044 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 MBNL2Q5VZF2 373 aaKnown RBP11.24□□□□□ -0.61
VCL-205ENST00000478896 RFPL4BQ6ZWI9 263 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 CCDC80Q76M96 950 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 C1orf174Q8IYL3 243 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 ALDH16A1Q8IZ83 802 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 KLF14Q8TD94 323 aaPredicted RBP11.24□□□□□ -0.61
VCL-205ENST00000478896 TSPEARQ8WU66 669 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 GEMIN6Q8WXD5 167 aaKnown RBP11.24□□□□□ -0.61
VCL-205ENST00000478896 NABP1Q96AH0 204 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 MARS2Q96GW9 593 aaKnown RBP11.24□□□□□ -0.61
VCL-205ENST00000478896 ECSITQ9BQ95 431 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 TXNIPQ9H3M7 391 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 NPHS2Q9NP85 383 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 DDX28Q9NUL7 540 aaKnown RBP11.24□□□□□ -0.61
VCL-205ENST00000478896 UGT2A1Q9Y4X1 527 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 PPIAL4AQ9Y536 164 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 WNK2Q9Y3S1 2297 aa11.24□□□□□ -0.61
VCL-205ENST00000478896 LOC100509620A0A075B734 347 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 A0A1W2PPL8 197 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 NPIPB13A6NJU9 1138 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 NPIPB4C9JG80 1138 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 WIPF1O43516 503 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 TIMM8AO60220 97 aaPredicted RBP11.23□□□□□ -0.61
VCL-205ENST00000478896 PIP5K1CO60331 668 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 FOXH1O75593 365 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 UBOX5O94941 541 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 IGF2P01344 180 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 IFNA14P01570 189 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 EGR1P18146 543 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 IFNA8P32881 189 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 OR1E2P47887 323 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 CRYBA2P53672 197 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 LAPTM4AQ15012 233 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 LRRC23Q53EV4 343 aaPredicted RBP11.23□□□□□ -0.61
VCL-205ENST00000478896 AWAT1Q58HT5 328 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 TTMPQ5BVD1 217 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 ARMCX4Q5H9R4 360 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 RBMS3Q6XE24 437 aaKnown RBP11.23□□□□□ -0.61
VCL-205ENST00000478896 STON2Q8WXE9 905 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 RBP7Q96R05 134 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 SH3GL1Q99961 368 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 ALG12Q9BV10 488 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 OR2H1Q9GZK4 316 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 ELOVL3Q9HB03 270 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 NTN4Q9HB63 628 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 MSL2Q9HCI7 577 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 RIMS3Q9UJD0 308 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 ZDHHC8Q9ULC8 765 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 ARHGAP32A7KAX9 2087 aa11.23□□□□□ -0.61
VCL-205ENST00000478896 A0A0G2JND7 137 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 H3BSA7 217 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 IFI30P13284 250 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 LAP3P28838 519 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 GZMMP51124 257 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 RPL27P61353 136 aaKnown RBP11.22□□□□□ -0.61
VCL-205ENST00000478896 PCBD1P61457 104 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 UBA52P62987 128 aaKnown RBP11.22□□□□□ -0.61
VCL-205ENST00000478896 TNFAIP6P98066 277 aaPredicted RBP11.22□□□□□ -0.61
VCL-205ENST00000478896 MTX3Q5HYI7 312 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 RABL3Q5HYI8 236 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 TMEM255AQ5JRV8 349 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 FAM27BQ5VT28 67 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 NANOGP8Q6NSW7 305 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 ERICH5Q6P6B1 374 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 SLC25A47Q6Q0C1 308 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms