RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 METTL17Q9H7H0 456 aaPredicted RBP12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 ELOVL3Q9HB03 270 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 C20orf141Q9NUB4 165 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 TREM2Q9NZC2 230 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 NDRG4Q9ULP0 352 aaKnown RBP12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 ANK3Q12955 4377 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 A0A0G2JMP0 313 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 A0A0X1KG70 313 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 C5orf49A4QMS7 147 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 C12orf71A8MTZ7 269 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 NDUFAB1O14561 156 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 SLC2A10O95528 541 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 CLPTM1O96005 669 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 PNPP00491 289 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 IGHMP01871 453 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 TSPAN19P0C672 248 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 IFI30P13284 250 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 ZNF32P17041 273 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 TNFRSF1BP20333 461 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 MAGEB1P43366 347 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 OR1E2P47887 323 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 SLC9A3P48764 834 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 SELENOWP63302 87 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 TRAM2Q15035 370 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 FAM27BQ5VT28 67 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 RRM2BQ7LG56 351 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 TREML1Q86YW5 311 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 MICU2Q8IYU8 434 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 OFCC1Q8IZS5 231 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 PAQR4Q8N4S7 273 aaPredicted RBP12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 OR4M2Q8NGB6 313 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 MOSPD2Q8NHP6 518 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 GEMIN6Q8WXD5 167 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 NSMAFQ92636 917 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 YIPF5Q969M3 257 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 ZNF583Q96ND8 569 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 JMJD8Q96S16 334 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 ZNF665Q9H7R5 613 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 LPAR2Q9HBW0 351 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 TIMM10BQ9Y5J6 103 aa12.34□□□□□ -0.43
SMARCE1-209ENST00000478349 J3QLI3 93 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 XKRYO14609 159 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 CDC14BO60729 498 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 SHOX2O60902 331 aaPredicted RBP12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 CST2P09228 141 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 ITGA2P17301 1181 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 GSTM3P21266 225 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 MSR1P21757 451 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 TUBG1P23258 451 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 GATA3P23771 443 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 GLO1Q04760 184 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 FAHD2BQ6P2I3 314 aaPredicted RBP12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 USP51Q70EK9 711 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 SYT9Q86SS6 491 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 OAFQ86UD1 273 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 CYP4Z1Q86W10 505 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 MEX3DQ86XN8 651 aaKnown RBP12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 RNF113BQ8IZP6 322 aaKnown RBP12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 NPEPL1Q8NDH3 523 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 FAHD2AQ96GK7 314 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 POM121L2Q96KW2 1035 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 COG8Q96MW5 612 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 SAR1AQ9NR31 198 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 TUBG2Q9NRH3 451 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 FGFR1OP2Q9NVK5 253 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 ZDHHC8Q9ULC8 765 aa12.33□□□□□ -0.44
SMARCE1-209ENST00000478349 LOC100653049A0A140TA62 436 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 A0A1W2PPL8 197 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 EFCAB9A8MZ26 197 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 FAM157AC9JC47 383 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 GSTA4O15217 222 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 AHCYL1O43865 530 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 KRT34O76011 436 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 H2AFXP16104 143 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 TNFSF4P23510 183 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 CDAP32320 146 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 CTXN1P60606 82 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 ERVS71-1P61550 626 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 ERVK-25P63136 954 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 MVKQ03426 396 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 FMODQ06828 376 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 SCRN3Q0VDG4 424 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 MBNL2Q5VZF2 373 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 SLC25A47Q6Q0C1 308 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 ZNF730Q6ZMV8 503 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 RP9Q8TA86 221 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 ABHD4Q8TB40 342 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 HDAC2Q92769 488 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 NABP1Q96AH0 204 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 NMD3Q96D46 503 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 GAL3ST1Q99999 423 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 OR2H1Q9GZK4 316 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 KRCC1Q9NPI7 259 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 GRHPRQ9UBQ7 328 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 TMEM5Q9Y2B1 443 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 UGT2A1Q9Y4X1 527 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 MALRD1Q5VYJ5 2156 aa12.32□□□□□ -0.44
SMARCE1-209ENST00000478349 ICMTO60725 284 aa12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 MPZL1O95297 269 aa12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 ZNF682O95780 498 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms