RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ZNF529Q6P280 563 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 VHLLQ6RSH7 139 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 MTSS1LQ765P7 747 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 TAF8Q7Z7C8 310 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 CACUL1Q86Y37 369 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 MCEMP1Q8IX19 187 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 KRTCAP2Q8N6L1 136 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 LMNTD1Q8N9Z9 388 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 OR52B4Q8NGK2 314 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 ZCCHC10Q8TBK6 192 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 PIK3IP1Q96FE7 263 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 IP6K3Q96PC2 410 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 CDC6Q99741 560 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 DPH1Q9BZG8 443 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 AUNIPQ9H7T9 357 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 COMMD9Q9P000 198 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 SUSD2Q9UGT4 822 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 CORO2BQ9UQ03 480 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 TRBV11-1A0A0K0K1C0 115 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 OR5H14A6NHG9 310 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 MANBAO00462 879 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 CYR61O00622 381 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 PRODHO43272 600 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 AIFM1O95831 613 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 ADH1BP00325 375 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 IFNA6P05013 189 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 FCGR3AP08637 254 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 IL6RP08887 468 aaPredicted RBP11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 CTXN2P0C2S0 81 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 FOSL2P15408 326 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 XCR1P46094 333 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 MTAPQ13126 283 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 DUSP8Q13202 625 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 HERPUD1Q15011 391 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 MAPK14Q16539 360 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 CRB2Q5IJ48 1285 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 TRAPPC5Q8IUR0 188 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 SFTPA1Q8IWL2 248 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 NAXEQ8NCW5 288 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 CCDC107Q8WV48 283 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 RELTQ969Z4 430 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 ZNF582Q96NG8 517 aaPredicted RBP11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 INTS14Q96SY0 518 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 KIR3DX1Q9H7L2 352 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 MSL2Q9HCI7 577 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 PTGFRNQ9P2B2 879 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 HDGFL3Q9Y3E1 203 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 A0A0G2JK05 382 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 CPED1A4D0V7 1026 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 SYT7O43581 403 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 SCAF4O95104 1147 aaKnown RBP11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 NT5EP21589 574 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 TNFRSF4P43489 277 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 AIMP2Q13155 320 aaKnown RBP11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 ZNF750Q32MQ0 723 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 PARM1Q6UWI2 310 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 WDR88Q6ZMY6 472 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 C1orf122Q6ZSJ8 110 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 PXKQ7Z7A4 578 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 SLC30A8Q8IWU4 369 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 MUC20Q8N307 709 aaPredicted RBP11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 ZFP41Q8N8Y5 198 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 SLC7A13Q8TCU3 470 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 BRIX1Q8TDN6 353 aaKnown RBP11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 FGF14Q92915 247 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 AKR1E2Q96JD6 320 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 CCDC74BQ96LY2 380 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 CLUHP3Q96NS8 147 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 SLC25A31Q9H0C2 315 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 ATG5Q9H1Y0 275 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 PLEKHA2Q9HB19 425 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 GPATCH2Q9NW75 528 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 GPR34Q9UPC5 381 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 ADAM18Q9Y3Q7 739 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 PCYT1BQ9Y5K3 369 aaPredicted RBP11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 LRRK1Q38SD2 2015 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 TMEM272A0A1B0GTI8 110 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 M0R036 132 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 PCDH7O60245 1069 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 IRF2P14316 349 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 ZNF16P17020 682 aaPredicted RBP11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 PPIBP23284 216 aaKnown RBP11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 BRS3P32247 399 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 FAUP35544 74 aaKnown RBP11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 SLC37A1P57057 533 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 ACTBP60709 375 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 ACTA2P62736 377 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 ACTG1P63261 375 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 ACTG2P63267 376 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 ACTC1P68032 377 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 ACTA1P68133 377 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 CSRP2Q16527 193 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 CPSF6Q16630 551 aaKnown RBP eCLIP11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 PGBD2Q6P3X8 592 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 INO80EQ8NBZ0 244 aaPredicted RBP11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 CSGALNACT1Q8TDX6 532 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 SHDQ96IW2 340 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 MICU1Q9BPX6 476 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 SELENOIQ9C0D9 397 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 LRTM1Q9HBL6 345 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms