RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 OR8J1Q8NGP2 316 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 OR52N5Q8NH56 324 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 NANOS1Q8WY41 292 aaKnown RBP13.41□□□□□ -0.26
SEC13-215ENST00000477547 BCL2L2Q92843 193 aaPredicted RBP13.41□□□□□ -0.26
SEC13-215ENST00000477547 NABP1Q96AH0 204 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 APOL4Q9BPW4 351 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 MED18Q9BUE0 208 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 OR51V1Q9H2C8 321 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 POLE4Q9NR33 117 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 SLC17A5Q9NRA2 495 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 POLR1DQ9Y2S0 133 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 AMDHD2Q9Y303 409 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 A0A1W2PR80 420 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 SH3D21A4FU49 640 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 H0YJX3 145 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 PRODHO43272 600 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 TLX2O43763 284 aaPredicted RBP13.4□□□□□ -0.26
SEC13-215ENST00000477547 CLIC3O95833 236 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 HLA-DQA2P01906 255 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 OR8G3PP0DMU2 310 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 NPR2P20594 1047 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 PEX19P40855 299 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 GUCA1AP43080 201 aaPredicted RBP13.4□□□□□ -0.26
SEC13-215ENST00000477547 RPS7P62081 194 aaKnown RBP13.4□□□□□ -0.26
SEC13-215ENST00000477547 TUBA1BP68363 451 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 TUBA4AP68366 448 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 SGCAQ16586 387 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 TIMM23BQ5SRD1 257 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 TTC23Q5W5X9 447 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 TUBA1AQ71U36 451 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 SLC26A10Q8NG04 563 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 ZC3HAV1LQ96H79 300 aaKnown RBP13.4□□□□□ -0.26
SEC13-215ENST00000477547 MUS81Q96NY9 551 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 SH3GL3Q99963 347 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 USB1Q9BQ65 265 aaKnown RBP13.4□□□□□ -0.26
SEC13-215ENST00000477547 EMC7Q9NPA0 242 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 DNAJC27Q9NZQ0 273 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 ITGB1BP2Q9UKP3 347 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 NF1P21359 2839 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 MED13LQ71F56 2210 aa13.4□□□□□ -0.26
SEC13-215ENST00000477547 ARPC4-TTLL3A0A0A6YYG9 625 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 TUBAL3A6NHL2 446 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 H0YAE9 185 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 IGFBP2P18065 325 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 SLC2A5P22732 501 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 HSPA13P48723 471 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 ADARB1P78563 741 aaKnown RBP13.39□□□□□ -0.27
SEC13-215ENST00000477547 APOFQ13790 326 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 TAB1Q15750 504 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 MEP1BQ16820 701 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 LCN1P1Q5VSP4 162 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 ZNF691Q5VV52 312 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 NXNL2Q5VZ03 156 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 OTPQ5XKR4 325 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 ALKBH2Q6NS38 261 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 LYPD4Q6UWN0 246 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 MEX3BQ6ZN04 569 aaKnown RBP13.39□□□□□ -0.27
SEC13-215ENST00000477547 SLC16A14Q7RTX9 510 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 BCDIN3DQ7Z5W3 292 aaKnown RBP13.39□□□□□ -0.27
SEC13-215ENST00000477547 P2RY8Q86VZ1 359 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 GID4Q8IVV7 300 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 ENTHD1Q8IYW4 607 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 LRRC18Q8N456 261 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 SETD9Q8NE22 299 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 OR10H5Q8NGA6 315 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 ZNRF4Q8WWF5 429 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 MUCL1Q96DR8 90 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 BOD1Q96IK1 185 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 SIAEQ9HAT2 523 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 OBP2BQ9NPH6 170 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 RASSF1Q9NS23 344 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 NDRG3Q9UGV2 375 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 COMMD3-BMI1R4GMX3 469 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 HEATR1Q9H583 2144 aaKnown RBP13.39□□□□□ -0.27
SEC13-215ENST00000477547 ZNF503-AS2A6NEH8 195 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 TVP23AA6NH52 213 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 GLCEO94923 617 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 UBL3O95164 117 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 MPZL1O95297 269 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 WNT11O96014 354 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 HLA-HP01893 362 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 FMO3P31513 532 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 CDH11P55287 796 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 EFNB1P98172 346 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 IL5RAQ01344 420 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 HSF2Q03933 536 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 IL18R1Q13478 541 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 ENDOGQ14249 297 aaKnown RBP13.39□□□□□ -0.27
SEC13-215ENST00000477547 PPA1Q15181 289 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 SLC35D3Q5M8T2 416 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 C6orf52Q5T4I8 152 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 LINC01590Q5TEZ4 76 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 AADACL4Q5VUY2 407 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 UGT2A3Q6UWM9 527 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 WFDC8Q8IUA0 241 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 SKA3Q8IX90 412 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 WDR31Q8NA23 367 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 LINC01560Q8TB33 94 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 TRUB1Q8WWH5 349 aaKnown RBP13.39□□□□□ -0.27
SEC13-215ENST00000477547 C11orf40Q8WZ69 217 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms