RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 LRMDAQ9H2I8 198 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 CDH20Q9HBT6 801 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 DYNLRB1Q9NP97 96 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 IL1RAPQ9NPH3 570 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 TMCC3Q9ULS5 477 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 SIGLEC7Q9Y286 467 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 UGT2A1Q9Y4X1 527 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 MALRD1Q5VYJ5 2156 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 IGKV1D-43A0A0B4J1Z2 117 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 A0A1W2PPL8 197 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 UNC119BA6NIH7 251 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 H7C1C5 153 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 OR10H3O60404 316 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 STAMBPO95630 424 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 ATP6V1B2P21281 511 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 RRM2P31350 389 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 IFNGR2P38484 337 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 LCN6P62502 163 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 KRR1Q13601 381 aaKnown RBP13.95□□□□□ -0.18
COL1A1-205ENST00000476387 GGTLC2Q14390 218 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 TBC1D28Q2M2D7 210 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 IQCCQ4KMZ1 466 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 GPR139Q6DWJ6 353 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 RINLQ6ZS11 566 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 OR1J2Q8NGS2 313 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 BCAS4Q8TDM0 211 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 Q96M85 177 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 FOXN4Q96NZ1 517 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 DOK1Q99704 481 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 BEX2Q9BXY8 128 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 FAM53CQ9NYF3 392 aa13.95□□□□□ -0.18
COL1A1-205ENST00000476387 PRPF19Q9UMS4 504 aaKnown RBP13.95□□□□□ -0.18
COL1A1-205ENST00000476387 TEX13CA0A0J9YWL9 993 aa13.94□□□□□ -0.18
COL1A1-205ENST00000476387 SLC22A23A1A5C7 686 aa13.94□□□□□ -0.18
COL1A1-205ENST00000476387 ZNF16P17020 682 aaPredicted RBP13.94□□□□□ -0.18
COL1A1-205ENST00000476387 SDHAP31040 664 aa13.94□□□□□ -0.18
COL1A1-205ENST00000476387 APLNRP35414 380 aa13.94□□□□□ -0.18
COL1A1-205ENST00000476387 GLRXP35754 106 aa13.94□□□□□ -0.18
COL1A1-205ENST00000476387 MESTQ5EB52 335 aa13.94□□□□□ -0.18
COL1A1-205ENST00000476387 LCN8Q6JVE9 175 aa13.94□□□□□ -0.18
COL1A1-205ENST00000476387 DHFR2Q86XF0 187 aa13.94□□□□□ -0.18
COL1A1-205ENST00000476387 FANK1Q8TC84 345 aa13.94□□□□□ -0.18
COL1A1-205ENST00000476387 NEU4Q8WWR8 484 aaPredicted RBP13.94□□□□□ -0.18
COL1A1-205ENST00000476387 MRPL24Q96A35 216 aaKnown RBP13.94□□□□□ -0.18
COL1A1-205ENST00000476387 NABP1Q96AH0 204 aa13.94□□□□□ -0.18
COL1A1-205ENST00000476387 GPX7Q96SL4 187 aaPredicted RBP13.94□□□□□ -0.18
COL1A1-205ENST00000476387 FUZQ9BT04 418 aa13.94□□□□□ -0.18
COL1A1-205ENST00000476387 IL20RAQ9UHF4 553 aa13.94□□□□□ -0.18
COL1A1-205ENST00000476387 CUBNO60494 3623 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 TMEM129A0AVI4 362 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 AHCYL1O43865 530 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 LMX1BO60663 402 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 MMP7P09237 267 aaPredicted RBP13.93□□□□□ -0.18
COL1A1-205ENST00000476387 APEHP13798 732 aaKnown RBP13.93□□□□□ -0.18
COL1A1-205ENST00000476387 ZNF26P17031 533 aaPredicted RBP13.93□□□□□ -0.18
COL1A1-205ENST00000476387 ZNF32P17041 273 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 GIFP27352 417 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 EVX1P49640 407 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 RPS6KA3P51812 740 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 PCBD1P61457 104 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 TRIM25Q14258 630 aaKnown RBP13.93□□□□□ -0.18
COL1A1-205ENST00000476387 CARTPTQ16568 116 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 PABPC1L2AQ5JQF8 200 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 FAM27BQ5VT28 67 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 FAM166AQ6J272 317 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 SMARCD3Q6STE5 483 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 THSD4Q6ZMP0 1018 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 DPY19L2P2Q6ZN68 376 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 TRPM8Q7Z2W7 1104 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 FAM122BQ7Z309 247 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 ADCK1Q86TW2 530 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 TMEM158Q8WZ71 300 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 POP5Q969H6 163 aaKnown RBP13.93□□□□□ -0.18
COL1A1-205ENST00000476387 CCDC124Q96CT7 223 aaKnown RBP13.93□□□□□ -0.18
COL1A1-205ENST00000476387 RASD2Q96D21 266 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 LRGUKQ96M69 825 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 SHARPINQ9H0F6 387 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 NRIP3Q9NQ35 241 aa13.93□□□□□ -0.18
COL1A1-205ENST00000476387 IGHV4-61A0A0C4DH41 118 aa13.92□□□□□ -0.18
COL1A1-205ENST00000476387 PRSS37A4D1T9 235 aa13.92□□□□□ -0.18
COL1A1-205ENST00000476387 RNF212BA8MTL3 300 aa13.92□□□□□ -0.18
COL1A1-205ENST00000476387 SOCS2O14508 198 aa13.92□□□□□ -0.18
COL1A1-205ENST00000476387 PTP4A3O75365 173 aa13.92□□□□□ -0.18
COL1A1-205ENST00000476387 KRT36O76013 467 aa13.92□□□□□ -0.18
COL1A1-205ENST00000476387 SNAP29O95721 258 aa13.92□□□□□ -0.18
COL1A1-205ENST00000476387 CST2P09228 141 aa13.92□□□□□ -0.18
COL1A1-205ENST00000476387 FAM157BP0CG42 384 aa13.92□□□□□ -0.18
COL1A1-205ENST00000476387 T-ENOLP0DO92 83 aa13.92□□□□□ -0.18
COL1A1-205ENST00000476387 CCL2P13500 99 aa13.92□□□□□ -0.18
COL1A1-205ENST00000476387 ZNF23P17027 643 aa13.92□□□□□ -0.18
COL1A1-205ENST00000476387 MSR1P21757 451 aa13.92□□□□□ -0.18
COL1A1-205ENST00000476387 FPR3P25089 353 aa13.92□□□□□ -0.18
COL1A1-205ENST00000476387 APEX1P27695 318 aaKnown RBP13.92□□□□□ -0.18
COL1A1-205ENST00000476387 LAP3P28838 519 aa13.92□□□□□ -0.18
COL1A1-205ENST00000476387 THBS2P35442 1172 aa13.92□□□□□ -0.18
COL1A1-205ENST00000476387 RGS7BPQ6MZT1 257 aaPredicted RBP13.92□□□□□ -0.18
COL1A1-205ENST00000476387 FOXL2NBQ6ZUU3 175 aa13.92□□□□□ -0.18
COL1A1-205ENST00000476387 ZER1Q7Z7L7 766 aa13.92□□□□□ -0.18
COL1A1-205ENST00000476387 MSI2Q96DH6 328 aaKnown RBP13.92□□□□□ -0.18
COL1A1-205ENST00000476387 SYT3Q9BQG1 590 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms