RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 ICA1LQ8NDH6 482 aa11.11□□□□□ -0.63
MRPL55-228ENST00000476267 AKR7LQ8NHP1 331 aa11.11□□□□□ -0.63
MRPL55-228ENST00000476267 SLC25A40Q8TBP6 338 aa11.11□□□□□ -0.63
MRPL55-228ENST00000476267 KLF14Q8TD94 323 aaPredicted RBP11.11□□□□□ -0.63
MRPL55-228ENST00000476267 SLC26A7Q8TE54 656 aa11.11□□□□□ -0.63
MRPL55-228ENST00000476267 DVL3Q92997 716 aaPredicted RBP11.11□□□□□ -0.63
MRPL55-228ENST00000476267 ZMYND19Q96E35 227 aaPredicted RBP11.11□□□□□ -0.63
MRPL55-228ENST00000476267 SGTBQ96EQ0 304 aa11.11□□□□□ -0.63
MRPL55-228ENST00000476267 ELMOD3Q96FG2 381 aa11.11□□□□□ -0.63
MRPL55-228ENST00000476267 THOC1Q96FV9 657 aaKnown RBP11.11□□□□□ -0.63
MRPL55-228ENST00000476267 SLC6A7Q99884 636 aa11.11□□□□□ -0.63
MRPL55-228ENST00000476267 RBM4Q9BWF3 364 aaKnown RBP11.11□□□□□ -0.63
MRPL55-228ENST00000476267 OR2J1Q9GZK6 312 aa11.11□□□□□ -0.63
MRPL55-228ENST00000476267 WNT5BQ9H1J7 359 aa11.11□□□□□ -0.63
MRPL55-228ENST00000476267 LRMDAQ9H2I8 198 aa11.11□□□□□ -0.63
MRPL55-228ENST00000476267 TXNIPQ9H3M7 391 aa11.11□□□□□ -0.63
MRPL55-228ENST00000476267 DECR2Q9NUI1 292 aa11.11□□□□□ -0.63
MRPL55-228ENST00000476267 STX18Q9P2W9 335 aaKnown RBP11.11□□□□□ -0.63
MRPL55-228ENST00000476267 RIMS3Q9UJD0 308 aa11.11□□□□□ -0.63
MRPL55-228ENST00000476267 SH3GLB1Q9Y371 365 aa11.11□□□□□ -0.63
MRPL55-228ENST00000476267 H3BSA7 217 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 PIP5K1CO60331 668 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 NGFP01138 241 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 MT-ND5P03915 603 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 CD55P08174 381 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 THRBP10828 461 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 DRD4P21917 467 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 GATA3P23771 443 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 LIMS1P48059 325 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 ERVK-25P63136 954 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 HNRNPA0Q13151 305 aaKnown RBP11.1□□□□□ -0.63
MRPL55-228ENST00000476267 LAPTM4AQ15012 233 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 ZNF718Q3SXZ3 478 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 RABL3Q5HYI8 236 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 DCAF12L2Q5VW00 463 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 CLDN22Q8N7P3 220 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 LRRC75AQ8NAA5 344 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 RAB1CQ92928 201 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 MAGEB18Q96M61 343 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 JMJD8Q96S16 334 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 ALG12Q9BV10 488 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 SUCNR1Q9BXA5 334 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 OR2H1Q9GZK4 316 aa11.1□□□□□ -0.63
MRPL55-228ENST00000476267 PPIAL4EA0A075B759 164 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 PPIAL4CA0A0B4J2A2 164 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 C5orf49A4QMS7 147 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 PPIAL4DF5H284 164 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 SPRY3O43610 288 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 EDF1O60869 148 aaKnown RBP11.09□□□□□ -0.63
MRPL55-228ENST00000476267 SHOX2O60902 331 aaPredicted RBP11.09□□□□□ -0.63
MRPL55-228ENST00000476267 IGHV2-70P01814 119 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 CST2P09228 141 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 PPIAL4FP0DN26 164 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 CCNOP22674 350 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 OR1E2P47887 323 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 TAS2R41P59536 307 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 TAF11Q15544 211 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 METTL21CQ5VZV1 264 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 C1orf174Q8IYL3 243 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 OR8J3Q8NGG0 315 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 NANPQ8TBE9 248 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 DYDC1Q8WWB3 177 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 CCL17Q92583 94 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 NSMAFQ92636 917 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 GCDHQ92947 438 aaPredicted RBP11.09□□□□□ -0.63
MRPL55-228ENST00000476267 TIMD4Q96H15 378 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 ZNF583Q96ND8 569 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 KCNN2Q9H2S1 579 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 CCNB1IP1Q9NPC3 277 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 INTS9Q9NV88 658 aaKnown RBP11.09□□□□□ -0.63
MRPL55-228ENST00000476267 DCAF16Q9NXF7 216 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 CGGBP1Q9UFW8 167 aaPredicted RBP11.09□□□□□ -0.63
MRPL55-228ENST00000476267 BAG5Q9UL15 447 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 A4GNTQ9UNA3 340 aa11.09□□□□□ -0.63
MRPL55-228ENST00000476267 POLR3KQ9Y2Y1 108 aaPredicted RBP11.09□□□□□ -0.63
MRPL55-228ENST00000476267 GMNCA6NCL1 334 aa11.08□□□□□ -0.64
MRPL55-228ENST00000476267 TPD52L2O43399 206 aaKnown RBP11.08□□□□□ -0.64
MRPL55-228ENST00000476267 PRSS23O95084 383 aa11.08□□□□□ -0.64
MRPL55-228ENST00000476267 SCG5P05408 212 aa11.08□□□□□ -0.64
MRPL55-228ENST00000476267 NR2C1P13056 603 aa11.08□□□□□ -0.64
MRPL55-228ENST00000476267 ZFP36P26651 326 aaKnown RBP11.08□□□□□ -0.64
MRPL55-228ENST00000476267 LAP3P28838 519 aa11.08□□□□□ -0.64
MRPL55-228ENST00000476267 GCH1P30793 250 aa11.08□□□□□ -0.64
MRPL55-228ENST00000476267 RBMXP38159 391 aaKnown RBP11.08□□□□□ -0.64
MRPL55-228ENST00000476267 LIPAP38571 399 aa11.08□□□□□ -0.64
MRPL55-228ENST00000476267 GDI2P50395 445 aaKnown RBP11.08□□□□□ -0.64
MRPL55-228ENST00000476267 RPL27P61353 136 aaKnown RBP11.08□□□□□ -0.64
MRPL55-228ENST00000476267 UBA52P62987 128 aaKnown RBP11.08□□□□□ -0.64
MRPL55-228ENST00000476267 CD47Q08722 323 aa11.08□□□□□ -0.64
MRPL55-228ENST00000476267 ENDOGQ14249 297 aaKnown RBP11.08□□□□□ -0.64
MRPL55-228ENST00000476267 SGCAQ16586 387 aa11.08□□□□□ -0.64
MRPL55-228ENST00000476267 AWAT1Q58HT5 328 aa11.08□□□□□ -0.64
MRPL55-228ENST00000476267 ALG10Q5BKT4 473 aa11.08□□□□□ -0.64
MRPL55-228ENST00000476267 COQ5Q5HYK3 327 aa11.08□□□□□ -0.64
MRPL55-228ENST00000476267 C3orf56Q8N813 242 aa11.08□□□□□ -0.64
MRPL55-228ENST00000476267 DEFB108BQ8NET1 73 aa11.08□□□□□ -0.64
MRPL55-228ENST00000476267 SGMS2Q8NHU3 365 aa11.08□□□□□ -0.64
MRPL55-228ENST00000476267 ABHD4Q8TB40 342 aa11.08□□□□□ -0.64
MRPL55-228ENST00000476267 GEMIN6Q8WXD5 167 aaKnown RBP11.08□□□□□ -0.64
MRPL55-228ENST00000476267 LRRC58Q96CX6 371 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms