RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 RGS9O75916 674 aaPredicted RBP5.96□□□□□ -1.46
HDAC3-207ENST00000475549 UBOX5O94941 541 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 PRSS23O95084 383 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 LSP1P33241 339 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 DAP3P51398 398 aaKnown RBP5.96□□□□□ -1.46
HDAC3-207ENST00000475549 ZNF84P51523 738 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 ARFIP2P53365 341 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 RPL27P61353 136 aaKnown RBP5.96□□□□□ -1.46
HDAC3-207ENST00000475549 PLP2Q04941 152 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 PRKCDQ05655 676 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 TOP3AQ13472 1001 aaPredicted RBP5.96□□□□□ -1.46
HDAC3-207ENST00000475549 ENDOGQ14249 297 aaKnown RBP5.96□□□□□ -1.46
HDAC3-207ENST00000475549 SGCAQ16586 387 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 TSTQ16762 297 aaKnown RBP5.96□□□□□ -1.46
HDAC3-207ENST00000475549 TBC1D28Q2M2D7 210 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 ALG10Q5BKT4 473 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 MBNL2Q5VZF2 373 aaKnown RBP5.96□□□□□ -1.46
HDAC3-207ENST00000475549 OTPQ5XKR4 325 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 TMEM53Q6P2H8 277 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 ERICH5Q6P6B1 374 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 TMEM154Q6P9G4 183 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 UGT2A3Q6UWM9 527 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 FOXL2NBQ6ZUU3 175 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 RFPL4BQ6ZWI9 263 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 USP51Q70EK9 711 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 GLCCI1Q86VQ1 547 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 MICU2Q8IYU8 434 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 POU5F2Q8N7G0 328 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 ICA1LQ8NDH6 482 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 OR2T12Q8NG77 320 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 OR1J2Q8NGS2 313 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 OR1J1Q8NGS3 322 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 OR51A7Q8NH64 312 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 SLC25A40Q8TBP6 338 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 KLF14Q8TD94 323 aaPredicted RBP5.96□□□□□ -1.46
HDAC3-207ENST00000475549 IPCEF1Q8WWN9 437 aaPredicted RBP5.96□□□□□ -1.46
HDAC3-207ENST00000475549 TPD52L3Q96J77 140 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 LRRC37BQ96QE4 947 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 TMPRSS13Q9BYE2 586 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 BCL2L14Q9BZR8 327 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 OR2J1Q9GZK6 312 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 POLR2J2Q9GZM3 115 aaKnown RBP5.96□□□□□ -1.46
HDAC3-207ENST00000475549 POLR2J3Q9H1A7 115 aaKnown RBP5.96□□□□□ -1.46
HDAC3-207ENST00000475549 ZNF665Q9H7R5 613 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 ZNF446Q9NWS9 450 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 DCAF16Q9NXF7 216 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 SLCO1C1Q9NYB5 712 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 ARMCX1Q9P291 453 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 WIPI2Q9Y4P8 454 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 TRAV27A0A087WT01 109 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 A0A087WUU8 490 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 ELOVL7A1L3X0 281 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 H7C1C5 153 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 IMPA2O14732 288 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 SPRY3O43610 288 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 ICMTO60725 284 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 ENTPD5O75356 428 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 PTP4A3O75365 173 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 MPZL1O95297 269 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 PTHP01270 115 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 IGHV2-5P01817 119 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 IGHMP01871 453 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 TFP02787 698 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 ADH4P08319 380 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 CST2P09228 141 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 IFI30P13284 250 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 ADRA2CP18825 462 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 ZFP36P26651 326 aaKnown RBP5.95□□□□□ -1.46
HDAC3-207ENST00000475549 APLNRP35414 380 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 ZNF81P51508 661 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 SELENOVP59797 346 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 CTXN1P60606 82 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 LCN6P62502 163 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 GUCY1A3Q02108 690 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 HSF2Q03933 536 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 DBPQ10586 325 aaPredicted RBP5.95□□□□□ -1.46
HDAC3-207ENST00000475549 ST3GAL3Q11203 375 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 PSG7Q13046 419 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 PCGF3Q3KNV8 242 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 MMEL1Q495T6 779 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 LRRC23Q53EV4 343 aaPredicted RBP5.95□□□□□ -1.46
HDAC3-207ENST00000475549 ACSM5Q6NUN0 579 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 ZNF774Q6NX45 483 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 C8orf82Q6P1X6 216 aaPredicted RBP5.95□□□□□ -1.46
HDAC3-207ENST00000475549 Q6ZR03 302 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 OR13C2Q8NGS9 318 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 ABHD4Q8TB40 342 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 CCL17Q92583 94 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 RCN3Q96D15 328 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 C4orf45Q96LM5 186 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 PRRC1Q96M27 445 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 ALG12Q9BV10 488 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 LRMDAQ9H2I8 198 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 C1orf198Q9H425 327 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 POFUT1Q9H488 388 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 MSL2Q9HCI7 577 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 EMC7Q9NPA0 242 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 CCNB1IP1Q9NPC3 277 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 OPN4Q9UHM6 478 aa5.95□□□□□ -1.46
HDAC3-207ENST00000475549 ADAM18Q9Y3Q7 739 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms