RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 ZNF84P51523 738 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 RAB1AP62820 205 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 PIGFQ07326 219 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 FHL1Q13642 323 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 RCN1Q15293 331 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 KRTAP21-3Q3LHN1 58 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 NHLRC1Q6VVB1 395 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 DPPA2Q7Z7J5 298 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 CLDN22Q8N7P3 220 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 LRRC75AQ8NAA5 344 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 NUP37Q8NFH4 326 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 TEX47Q8TBZ9 253 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 ASB10Q8WXI3 467 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 TMEM54Q969K7 222 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 ZNF570Q96NI8 536 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 GPX7Q96SL4 187 aaPredicted RBP16.16■□□□□ 0.18
CCDC171-206ENST00000474193 VRK1Q99986 396 aaPredicted RBP16.16■□□□□ 0.18
CCDC171-206ENST00000474193 RBM4BQ9BQ04 359 aaKnown RBP16.16■□□□□ 0.18
CCDC171-206ENST00000474193 C9orf16Q9BUW7 83 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 RBM4Q9BWF3 364 aaKnown RBP16.16■□□□□ 0.18
CCDC171-206ENST00000474193 TEX12Q9BXU0 123 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 KCNN2Q9H2S1 579 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 EGLN3Q9H6Z9 239 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 KRT84Q9NSB2 600 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 ORC6Q9Y5N6 252 aa16.16■□□□□ 0.18
CCDC171-206ENST00000474193 ZNF469Q96JG9 3925 aaPredicted RBP16.16■□□□□ 0.18
CCDC171-206ENST00000474193 NIPBLQ6KC79 2804 aaeCLIP16.15■□□□□ 0.18
CCDC171-206ENST00000474193 CENPBD1B2RD01 187 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 DHHO43323 396 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 MGRN1O60291 552 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 SOX14O95416 240 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 F12P00748 615 aaPredicted RBP16.15■□□□□ 0.18
CCDC171-206ENST00000474193 HLA-HP01893 362 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 ACADSP16219 412 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 NPR2P20594 1047 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 POU1F1P28069 291 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 PTDSS1P48651 473 aaKnown RBP16.15■□□□□ 0.18
CCDC171-206ENST00000474193 GALK2Q01415 458 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 DAG1Q14118 895 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 CLEC12AQ5QGZ9 265 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 FAM168AQ92567 244 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 EME1Q96AY2 570 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 ERMAPQ96PL5 475 aaPredicted RBP16.15■□□□□ 0.18
CCDC171-206ENST00000474193 TSPAN32Q96QS1 320 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 TSSK6Q9BXA6 273 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 GABARAPL1Q9H0R8 117 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 RAB1BQ9H0U4 201 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 ZNF442Q9H7R0 627 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 DCLRE1BQ9H816 532 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 RNF121Q9H920 327 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 NRIP3Q9NQ35 241 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 IL20Q9NYY1 176 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 BAIAP2Q9UQB8 552 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 IER3IP1Q9Y5U9 82 aa16.15■□□□□ 0.18
CCDC171-206ENST00000474193 VPS13CQ709C8 3753 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 IMPA2O14732 288 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 IDH3BO43837 385 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 PPP1R3DO95685 299 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 PTHP01270 115 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 QDPRP09417 244 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 OSMP13725 252 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 APEHP13798 732 aaKnown RBP16.14■□□□□ 0.17
CCDC171-206ENST00000474193 ANPEPP15144 967 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 SLC25A16P16260 332 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 ZNF26P17031 533 aaPredicted RBP16.14■□□□□ 0.17
CCDC171-206ENST00000474193 HOXB4P17483 251 aaPredicted RBP16.14■□□□□ 0.17
CCDC171-206ENST00000474193 CALCRP30988 508 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 SDHAP31040 664 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 GUCA1AP43080 201 aaPredicted RBP16.14■□□□□ 0.17
CCDC171-206ENST00000474193 DAPP51397 102 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 SWI5Q1ZZU3 235 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 SLC36A3Q495N2 470 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 ARMC4Q5T2S8 1044 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 TMEM53Q6P2H8 277 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 FAHD1Q6P587 224 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 THSD4Q6ZMP0 1018 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 JAZF1Q86VZ6 243 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 ARIH2OSQ8N7S6 290 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 OR2T33Q8NG76 320 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 FNDC8Q8TC99 324 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 RBP7Q96R05 134 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 CIB1Q99828 191 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 B3GNT2Q9NY97 397 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 ADAM18Q9Y3Q7 739 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 CMAHPQ9Y471 501 aa16.14■□□□□ 0.17
CCDC171-206ENST00000474193 HIVEP2P31629 2446 aa16.13■□□□□ 0.17
CCDC171-206ENST00000474193 IGHV2OR16-5A0A0B4J2B6 119 aa16.13■□□□□ 0.17
CCDC171-206ENST00000474193 TRMUO75648 421 aaKnown RBP16.13■□□□□ 0.17
CCDC171-206ENST00000474193 CELA3BP08861 270 aa16.13■□□□□ 0.17
CCDC171-206ENST00000474193 PGA4P0DJD7 388 aa16.13■□□□□ 0.17
CCDC171-206ENST00000474193 PGA3P0DJD8 388 aa16.13■□□□□ 0.17
CCDC171-206ENST00000474193 IGFBP5P24593 272 aa16.13■□□□□ 0.17
CCDC171-206ENST00000474193 GIPRP48546 466 aa16.13■□□□□ 0.17
CCDC171-206ENST00000474193 FXYD6P3P58550 94 aa16.13■□□□□ 0.17
CCDC171-206ENST00000474193 RPS23P62266 143 aaKnown RBP16.13■□□□□ 0.17
CCDC171-206ENST00000474193 CD47Q08722 323 aa16.13■□□□□ 0.17
CCDC171-206ENST00000474193 EFNB3Q15768 340 aa16.13■□□□□ 0.17
CCDC171-206ENST00000474193 ADIPOQQ15848 244 aa16.13■□□□□ 0.17
CCDC171-206ENST00000474193 SLC36A2Q495M3 483 aa16.13■□□□□ 0.17
CCDC171-206ENST00000474193 DNM1P46Q6ZS02 220 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms