RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 CDH20Q9HBT6 801 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.94□□□□□ -0.5
USF1-205ENST00000473969 KLHL21Q9UJP4 597 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 COA3Q9Y2R0 106 aaPredicted RBP11.94□□□□□ -0.5
USF1-205ENST00000473969 POLR1DQ9Y2S0 133 aa11.94□□□□□ -0.5
USF1-205ENST00000473969 POLQO75417 2590 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 HLA-DQA2P01906 255 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 CTLA4P16410 223 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 PRKACGP22612 351 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 CALCRP30988 508 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 ATP6AP1Q15904 470 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 ETFDHQ16134 617 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 SHQ1Q6PI26 577 aaKnown RBP11.93□□□□□ -0.5
USF1-205ENST00000473969 UNQ6126/PRO20091Q6UXV3 157 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 FOXL2NBQ6ZUU3 175 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 TMEM179BQ7Z7N9 219 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 SYT9Q86SS6 491 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 LRRC75A-AS1Q8N1F1 130 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 SLC30A7Q8NEW0 376 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 SDR9C7Q8NEX9 313 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 NUP37Q8NFH4 326 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 OR10H5Q8NGA6 315 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 FGFBP3Q8TAT2 258 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 DNAJC9Q8WXX5 260 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 NABP1Q96AH0 204 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 PERPQ96FX8 193 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 DUS3LQ96G46 650 aaKnown RBP11.93□□□□□ -0.5
USF1-205ENST00000473969 MS4A3Q96HJ5 214 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 PLA2G12AQ9BZM1 189 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 NOX3Q9HBY0 568 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 RPRD1BQ9NQG5 326 aaKnown RBP11.93□□□□□ -0.5
USF1-205ENST00000473969 POLE4Q9NR33 117 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 CA10Q9NS85 328 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 CBLN4Q9NTU7 201 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 ZNF224Q9NZL3 707 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 PMF1-BGLAPU3KQ54 211 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 PRR14LQ5THK1 2151 aa11.93□□□□□ -0.5
USF1-205ENST00000473969 ANKRD17O75179 2603 aaKnown RBP11.93□□□□□ -0.5
USF1-205ENST00000473969 CREBBPQ92793 2442 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 RIIAD1A6NNX1 92 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 G3V2T6 193 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 BHLHE40O14503 412 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 SOD3P08294 240 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 DANCRP0C864 163 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 OSMP13725 252 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 ZNF23P17027 643 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 ZNF32P17041 273 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 CCNOP22674 350 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 RPS23P62266 143 aaKnown RBP11.92□□□□□ -0.5
USF1-205ENST00000473969 NKX6-1P78426 367 aaPredicted RBP11.92□□□□□ -0.5
USF1-205ENST00000473969 GLO1Q04760 184 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 SCRN3Q0VDG4 424 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 SNTB2Q13425 540 aaKnown RBP11.92□□□□□ -0.5
USF1-205ENST00000473969 PGGHGQ32M88 737 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 SLC36A3Q495N2 470 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 PABPC1L2AQ5JQF8 200 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 KRT80Q6KB66 452 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 B3GLCTQ6Y288 498 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 ZDHHC13Q8IUH4 622 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 LNX2Q8N448 690 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 UTP4Q969X6 686 aaKnown RBP11.92□□□□□ -0.5
USF1-205ENST00000473969 FBXO17Q96EF6 278 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 FOXN4Q96NZ1 517 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 TRAF4Q9BUZ4 470 aaPredicted RBP11.92□□□□□ -0.5
USF1-205ENST00000473969 CDADC1Q9BWV3 514 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 EIF3KQ9UBQ5 218 aaKnown RBP11.92□□□□□ -0.5
USF1-205ENST00000473969 B9D1Q9UPM9 204 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 CMAHPQ9Y471 501 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 FKBP7Q9Y680 259 aa11.92□□□□□ -0.5
USF1-205ENST00000473969 AKAP6Q13023 2319 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 IGFBP1P08833 259 aaPredicted RBP11.91□□□□□ -0.5
USF1-205ENST00000473969 MMP7P09237 267 aaPredicted RBP11.91□□□□□ -0.5
USF1-205ENST00000473969 ZNF3P17036 446 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 NR4A1P22736 598 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 STOMP27105 288 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 SERPINF1P36955 418 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 PTH2RP49190 550 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 GDI2P50395 445 aaKnown RBP11.91□□□□□ -0.5
USF1-205ENST00000473969 ATP5J2P56134 94 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 ACTR3P61158 418 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 LSM6P62312 80 aaKnown RBP11.91□□□□□ -0.5
USF1-205ENST00000473969 KPNB1Q14974 876 aaKnown RBP11.91□□□□□ -0.5
USF1-205ENST00000473969 SHEQ5VZ18 495 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 SLC27A4Q6P1M0 643 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 ZFP1Q6P2D0 407 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 YTHDF3Q7Z739 585 aaKnown RBP11.91□□□□□ -0.5
USF1-205ENST00000473969 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.91□□□□□ -0.5
USF1-205ENST00000473969 AMIGO2Q86SJ2 522 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 DTX2Q86UW9 622 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 MYPOPQ86VE0 399 aaPredicted RBP11.91□□□□□ -0.5
USF1-205ENST00000473969 HS3ST5Q8IZT8 346 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 OR6V1Q8N148 313 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 SVOPLQ8N434 492 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 NPEPL1Q8NDH3 523 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 PROKR2Q8NFJ6 384 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 OR8D4Q8NGM9 314 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 OR2T4Q8NH00 348 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 LRTOMTQ8WZ04 291 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 OTULINQ96BN8 352 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 ZNF75AQ96N20 296 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms