RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 ELOVL3Q9HB03 270 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 KLHL21Q9UJP4 597 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 PCDHB10Q9UN67 800 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 TIMM10BQ9Y5J6 103 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 TMEM89A2RUT3 159 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 A6NIZ1 184 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 TRIM77I1YAP6 450 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 FXYD1O00168 92 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 FBP2O00757 339 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 VENTXO95231 258 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 IGHV2-5P01817 119 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 CST2P09228 141 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 COX5BP10606 129 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 AQP2P41181 271 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 GDI2P50395 445 aaKnown RBP11.52□□□□□ -0.57
CHD3-209ENST00000473376 ZNF81P51508 661 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 RAP1BP61224 184 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 RPL27P61353 136 aaKnown RBP11.52□□□□□ -0.57
CHD3-209ENST00000473376 RAP1AP62834 184 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 SRSF2Q01130 221 aaKnown RBP11.52□□□□□ -0.57
CHD3-209ENST00000473376 FAHD2BQ6P2I3 314 aaPredicted RBP11.52□□□□□ -0.57
CHD3-209ENST00000473376 SLC25A47Q6Q0C1 308 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 HDXQ7Z353 690 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 C1QL2Q7Z5L3 287 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 PEG10Q86TG7 708 aaKnown RBP11.52□□□□□ -0.57
CHD3-209ENST00000473376 TREML1Q86YW5 311 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 NKAIN4Q8IVV8 208 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 RNF113BQ8IZP6 322 aaKnown RBP11.52□□□□□ -0.57
CHD3-209ENST00000473376 SYT14Q8NB59 555 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 PCYOX1LQ8NBM8 494 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 NANPQ8TBE9 248 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 TMEM255BQ8WV15 326 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 FAHD2AQ96GK7 314 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 ZNF583Q96ND8 569 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 C20orf141Q9NUB4 165 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 WIPI2Q9Y4P8 454 aa11.52□□□□□ -0.57
CHD3-209ENST00000473376 A0A0G2JND7 137 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 PLPP2O43688 288 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 UBOX5O94941 541 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 MPZL1O95297 269 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 CCL2P13500 99 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 ZNF32P17041 273 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 CFPP27918 469 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 KDELR2P33947 212 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 SLC9A3P48764 834 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 ARHGDIAP52565 204 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 SELENOWP63302 87 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 PSG4Q00888 419 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 PIN1Q13526 163 aaPredicted RBP11.51□□□□□ -0.57
CHD3-209ENST00000473376 ALG10Q5BKT4 473 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 USP51Q70EK9 711 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 LRRC18Q8N456 261 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.51□□□□□ -0.57
CHD3-209ENST00000473376 PFN4Q8NHR9 129 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 KLF14Q8TD94 323 aaPredicted RBP11.51□□□□□ -0.57
CHD3-209ENST00000473376 LZICQ8WZA0 190 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 HDAC2Q92769 488 aaKnown RBP11.51□□□□□ -0.57
CHD3-209ENST00000473376 BPIFA2Q96DR5 249 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 PRRC1Q96M27 445 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 COG8Q96MW5 612 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 TSPAN32Q96QS1 320 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 SUCNR1Q9BXA5 334 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 NPHS2Q9NP85 383 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 TBCCD1Q9NVR7 557 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 GID8Q9NWU2 228 aa11.51□□□□□ -0.57
CHD3-209ENST00000473376 NDRG4Q9ULP0 352 aaKnown RBP11.51□□□□□ -0.57
CHD3-209ENST00000473376 POLR3KQ9Y2Y1 108 aaPredicted RBP11.51□□□□□ -0.57
CHD3-209ENST00000473376 LOC100509620A0A075B734 347 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 C12orf71A8MTZ7 269 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 FAM220BPB1ANY3 271 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 J3QW42 95 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 SLC22A2O15244 555 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 CDC14BO60729 498 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 IGHV1-46P01743 117 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 ADRA2CP18825 462 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 EPHA1P21709 976 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 WNT5AP41221 380 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 ERVS71-1P61550 626 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 CD47Q08722 323 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 LAPTM4AQ15012 233 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 TUSC1Q2TAM9 212 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 RABL3Q5HYI8 236 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 C1orf229Q6ZS94 237 aaPredicted RBP11.5□□□□□ -0.57
CHD3-209ENST00000473376 ZNF101Q8IZC7 436 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 SGMS2Q8NHU3 365 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 C10orf82Q8WW14 230 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 TMPRSS13Q9BYE2 586 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 OR2H1Q9GZK4 316 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 NARFLQ9H6Q4 476 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 NTN4Q9HB63 628 aa11.5□□□□□ -0.57
CHD3-209ENST00000473376 C5orf49A4QMS7 147 aa11.49□□□□□ -0.57
CHD3-209ENST00000473376 TPD52L2O43399 206 aaKnown RBP11.49□□□□□ -0.57
CHD3-209ENST00000473376 FOXH1O75593 365 aa11.49□□□□□ -0.57
CHD3-209ENST00000473376 SLC2A10O95528 541 aa11.49□□□□□ -0.57
CHD3-209ENST00000473376 MVKQ03426 396 aa11.49□□□□□ -0.57
CHD3-209ENST00000473376 SGCAQ16586 387 aa11.49□□□□□ -0.57
CHD3-209ENST00000473376 ALKBH6Q3KRA9 238 aa11.49□□□□□ -0.57
CHD3-209ENST00000473376 CYBRD1Q53TN4 286 aa11.49□□□□□ -0.57
CHD3-209ENST00000473376 DCAF12L2Q5VW00 463 aa11.49□□□□□ -0.57
CHD3-209ENST00000473376 ARPINQ7Z6K5 226 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms