RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 SDR9C7Q8NEX9 313 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 OR4Q3Q8NH05 313 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 AKAP1Q92667 903 aaKnown RBP eCLIP13.15□□□□□ -0.3
SNX13-205ENST00000471744 FBXW5Q969U6 566 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 SEMA6AQ9H2E6 1030 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 UBTD1Q9HAC8 227 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 CMC2Q9NRP2 79 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 KRT84Q9NSB2 600 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 POU2F3Q9UKI9 436 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 CYSRT1A8MQ03 144 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 TMCC2O75069 709 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 PLAUP00749 431 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 RAF1P04049 648 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 SERPINA5P05154 406 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 IGFBP1P08833 259 aaPredicted RBP13.14□□□□□ -0.31
SNX13-205ENST00000471744 ZNF14P17017 642 aaPredicted RBP13.14□□□□□ -0.31
SNX13-205ENST00000471744 DNASE1P24855 282 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 DAPP51397 102 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 CDH11P55287 796 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 LSM6P62312 80 aaKnown RBP13.14□□□□□ -0.31
SNX13-205ENST00000471744 PIGFQ07326 219 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 ETFDHQ16134 617 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 KDM4DQ6B0I6 523 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 ZBTB46Q86UZ6 589 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 ZNF611Q8N823 705 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 ICA1LQ8NDH6 482 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 KBTBD8Q8NFY9 601 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 OR4F15Q8NGB8 312 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 OR2T4Q8NH00 348 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 ZNF75AQ96N20 296 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 PKP2Q99959 881 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 RBM4BQ9BQ04 359 aaKnown RBP13.14□□□□□ -0.31
SNX13-205ENST00000471744 RBM4Q9BWF3 364 aaKnown RBP13.14□□□□□ -0.31
SNX13-205ENST00000471744 PRRG3Q9BZD7 231 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 RERGLQ9H628 205 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 SLC25A19Q9HC21 320 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 RPRD1BQ9NQG5 326 aaKnown RBP13.14□□□□□ -0.31
SNX13-205ENST00000471744 FAIMQ9NVQ4 179 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 ST6GALNAC2Q9UJ37 374 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 OAZ3Q9UMX2 235 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 B9D1Q9UPM9 204 aa13.14□□□□□ -0.31
SNX13-205ENST00000471744 COA3Q9Y2R0 106 aaPredicted RBP13.14□□□□□ -0.31
SNX13-205ENST00000471744 IGLV1-36A0A0B4J1U3 117 aa13.13□□□□□ -0.31
SNX13-205ENST00000471744 IQCMA0A1B0GVH7 501 aa13.13□□□□□ -0.31
SNX13-205ENST00000471744 OR6C68A6NDL8 312 aa13.13□□□□□ -0.31
SNX13-205ENST00000471744 MMP7P09237 267 aaPredicted RBP13.13□□□□□ -0.31
SNX13-205ENST00000471744 PAICSP22234 425 aaKnown RBP13.13□□□□□ -0.31
SNX13-205ENST00000471744 CENPAP49450 140 aa13.13□□□□□ -0.31
SNX13-205ENST00000471744 CRISP1P54107 249 aa13.13□□□□□ -0.31
SNX13-205ENST00000471744 CDK5Q00535 292 aa13.13□□□□□ -0.31
SNX13-205ENST00000471744 HSF2Q03933 536 aa13.13□□□□□ -0.31
SNX13-205ENST00000471744 SCRN3Q0VDG4 424 aa13.13□□□□□ -0.31
SNX13-205ENST00000471744 KEAP1Q14145 624 aa13.13□□□□□ -0.31
SNX13-205ENST00000471744 GINS1Q14691 196 aa13.13□□□□□ -0.31
SNX13-205ENST00000471744 KCNMB1Q16558 191 aa13.13□□□□□ -0.31
SNX13-205ENST00000471744 ALDH16A1Q8IZ83 802 aa13.13□□□□□ -0.31
SNX13-205ENST00000471744 OR6V1Q8N148 313 aa13.13□□□□□ -0.31
SNX13-205ENST00000471744 SLC37A3Q8NCC5 494 aa13.13□□□□□ -0.31
SNX13-205ENST00000471744 OR1J2Q8NGS2 313 aa13.13□□□□□ -0.31
SNX13-205ENST00000471744 DDOQ99489 341 aa13.13□□□□□ -0.31
SNX13-205ENST00000471744 SRA1Q9HD15 236 aaKnown RBP13.13□□□□□ -0.31
SNX13-205ENST00000471744 CISD1Q9NZ45 108 aaKnown RBP13.13□□□□□ -0.31
SNX13-205ENST00000471744 TIMM10BQ9Y5J6 103 aa13.13□□□□□ -0.31
SNX13-205ENST00000471744 HRNRQ86YZ3 2850 aaPredicted RBP13.13□□□□□ -0.31
SNX13-205ENST00000471744 FBN2P35556 2912 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 IGHV2OR16-5A0A0B4J2B6 119 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 SAC3D1A6NKF1 404 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 CELA3BP08861 270 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 PATE4P0C8F1 98 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 ZNF32P17041 273 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 IGFBP5P24593 272 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 BLVRAP53004 296 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 SLC25A1P53007 311 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 SPOCK1Q08629 439 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 AQP6Q13520 282 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 ENDOGQ14249 297 aaKnown RBP13.12□□□□□ -0.31
SNX13-205ENST00000471744 RAB39AQ14964 217 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 ZNF362Q5T0B9 420 aaPredicted RBP13.12□□□□□ -0.31
SNX13-205ENST00000471744 ZNF544Q6NX49 715 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 PQLC1Q8N2U9 271 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 IQCF1Q8N6M8 205 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 CYB561A3Q8NBI2 242 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 LILRB1Q8NHL6 650 aaPredicted RBP13.12□□□□□ -0.31
SNX13-205ENST00000471744 FGFBP3Q8TAT2 258 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 HTRA1Q92743 480 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 PIGTQ969N2 578 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 PLEKHA8Q96JA3 519 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 TSSK2Q96PF2 358 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 DHRS9Q9BPW9 319 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 ZNF416Q9BWM5 594 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 NOX3Q9HBY0 568 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 KCNG2Q9UJ96 466 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 MOKQ9UQ07 419 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 POLR1DQ9Y2S0 133 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 SPEF1Q9Y4P9 236 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 ATP23Q9Y6H3 246 aa13.12□□□□□ -0.31
SNX13-205ENST00000471744 VSTM5A8MXK1 200 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 ATP6V1G2-DDX39BF2Z307 99 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 DCTN6O00399 190 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 GAAP10253 952 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms