RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 GLB1L2Q8IW92 636 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 NUP37Q8NFH4 326 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 OR2T33Q8NG76 320 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 OR5K1Q8NHB7 308 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 DNAJC9Q8WXX5 260 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 MS4A3Q96HJ5 214 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 RAB3IPQ96QF0 476 aaPredicted RBP13.26□□□□□ -0.29
SDC3-203ENST00000471567 NMNAT3Q96T66 252 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 NUAK2Q9H093 628 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 CXXC4Q9H2H0 198 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 CXorf56Q9H5V9 222 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 PLCE1Q9P212 2302 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 REV1Q9UBZ9 1251 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 MYO9AB2RTY4 2548 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 C12orf71A8MTZ7 269 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 SMPD2O60906 423 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 SOX14O95416 240 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 SOD3P08294 240 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 IGFBP1P08833 259 aaPredicted RBP13.25□□□□□ -0.29
SDC3-203ENST00000471567 ZNF35P13682 527 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 PAX1P15863 534 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 PRKACGP22612 351 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 APOBEC3AP31941 199 aaPredicted RBP13.25□□□□□ -0.29
SDC3-203ENST00000471567 TTKP33981 857 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 FABP6P51161 128 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 ART1P52961 327 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.25□□□□□ -0.29
SDC3-203ENST00000471567 TESK1Q15569 626 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 KCNMB1Q16558 191 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 SLC35F1Q5T1Q4 408 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 HIPK1Q86Z02 1210 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 ZNF584Q8IVC4 421 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 HS3ST5Q8IZT8 346 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 FBXL14Q8N1E6 418 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 LRRC75A-AS1Q8N1F1 130 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 ATG16L2Q8NAA4 619 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 NPEPL1Q8NDH3 523 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 OR52E2Q8NGJ4 325 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 TEX47Q8TBZ9 253 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 FBXO17Q96EF6 278 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 RACGAP1Q9H0H5 632 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 KLHL21Q9UJP4 597 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 B9D1Q9UPM9 204 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 LAMP3Q9UQV4 416 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 COA3Q9Y2R0 106 aaPredicted RBP13.25□□□□□ -0.29
SDC3-203ENST00000471567 SPEF1Q9Y4P9 236 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 TIMM10BQ9Y5J6 103 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 FKBP7Q9Y680 259 aa13.25□□□□□ -0.29
SDC3-203ENST00000471567 IQCMA0A1B0GVH7 501 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 OR6C68A6NDL8 312 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 VSTM5A8MXK1 200 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 OVOL3O00110 214 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 OSMP13725 252 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 ZNF32P17041 273 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 LSM6P62312 80 aaKnown RBP13.24□□□□□ -0.29
SDC3-203ENST00000471567 HSF2Q03933 536 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 HGFACQ04756 655 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 ENDOGQ14249 297 aaKnown RBP13.24□□□□□ -0.29
SDC3-203ENST00000471567 KPNB1Q14974 876 aaKnown RBP13.24□□□□□ -0.29
SDC3-203ENST00000471567 SLC36A3Q495N2 470 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 ZNF362Q5T0B9 420 aaPredicted RBP13.24□□□□□ -0.29
SDC3-203ENST00000471567 ZFP1Q6P2D0 407 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 FAHD1Q6P587 224 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 ZBTB46Q86UZ6 589 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 OR6V1Q8N148 313 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 MUC15Q8N387 334 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 SLC30A7Q8NEW0 376 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 SDR9C7Q8NEX9 313 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 OR1J2Q8NGS2 313 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 OR4Q3Q8NH05 313 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 DDOQ99489 341 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 TRAF4Q9BUZ4 470 aaPredicted RBP13.24□□□□□ -0.29
SDC3-203ENST00000471567 ZNF416Q9BWM5 594 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 RERGLQ9H628 205 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 ZNF442Q9H7R0 627 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 SRA1Q9HD15 236 aaKnown RBP13.24□□□□□ -0.29
SDC3-203ENST00000471567 RPRD1BQ9NQG5 326 aaKnown RBP13.24□□□□□ -0.29
SDC3-203ENST00000471567 CA10Q9NS85 328 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 CBLN4Q9NTU7 201 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 ZNF701Q9NV72 531 aaPredicted RBP13.24□□□□□ -0.29
SDC3-203ENST00000471567 CSMD2Q7Z408 3487 aa13.24□□□□□ -0.29
SDC3-203ENST00000471567 CSMD1Q96PZ7 3565 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 IGLV1-36A0A0B4J1U3 117 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 G3V2T6 193 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 H3BN98 237 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 DCTN6O00399 190 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 IFNGP01579 166 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 CD8AP01732 235 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 SCG5P05408 212 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 NR4A1P22736 598 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 GRK5P34947 590 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 NKX6-1P78426 367 aaPredicted RBP13.23□□□□□ -0.29
SDC3-203ENST00000471567 PSG4Q00888 419 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 GLO1Q04760 184 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 TBC1D28Q2M2D7 210 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 PABPC1L2AQ5JQF8 200 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 ZDHHC13Q8IUH4 622 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 ALDH16A1Q8IZ83 802 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 SVOPLQ8N434 492 aa13.23□□□□□ -0.29
SDC3-203ENST00000471567 LRTOMTQ8WZ04 291 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms