RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ZNF547Q8IVP9 402 aa4.84□□□□□ -1.63
SMC5-202ENST00000471372 ZBED8Q8IZ13 594 aa4.84□□□□□ -1.63
SMC5-202ENST00000471372 CD177Q8N6Q3 437 aa4.84□□□□□ -1.63
SMC5-202ENST00000471372 FAM151AQ8WW52 585 aa4.84□□□□□ -1.63
SMC5-202ENST00000471372 MARC2Q969Z3 335 aa4.84□□□□□ -1.63
SMC5-202ENST00000471372 TMEM175Q9BSA9 504 aa4.84□□□□□ -1.63
SMC5-202ENST00000471372 CHID1Q9BWS9 393 aa4.84□□□□□ -1.63
SMC5-202ENST00000471372 TM6SF2Q9BZW4 377 aa4.84□□□□□ -1.63
SMC5-202ENST00000471372 SYNDIG1Q9H7V2 258 aa4.84□□□□□ -1.63
SMC5-202ENST00000471372 CTPS2Q9NRF8 586 aa4.84□□□□□ -1.63
SMC5-202ENST00000471372 CLN6Q9NWW5 311 aa4.84□□□□□ -1.63
SMC5-202ENST00000471372 VNN3Q9NY84 501 aa4.84□□□□□ -1.63
SMC5-202ENST00000471372 TMEM9Q9P0T7 183 aa4.84□□□□□ -1.63
SMC5-202ENST00000471372 ZNF107Q9UII5 783 aaPredicted RBP4.84□□□□□ -1.63
SMC5-202ENST00000471372 CLEC4EQ9ULY5 219 aa4.84□□□□□ -1.63
SMC5-202ENST00000471372 FLVCR2Q9UPI3 526 aa4.84□□□□□ -1.63
SMC5-202ENST00000471372 ST3GAL6Q9Y274 331 aa4.84□□□□□ -1.63
SMC5-202ENST00000471372 VSIG4Q9Y279 399 aa4.84□□□□□ -1.63
SMC5-202ENST00000471372 ADGRA3Q8IWK6 1321 aa4.83□□□□□ -1.64
SMC5-202ENST00000471372 TRAV6A0A075B6T7 132 aa4.83□□□□□ -1.64
SMC5-202ENST00000471372 TSPAN11A1L157 253 aa4.83□□□□□ -1.64
SMC5-202ENST00000471372 HIDE1A8MVS5 230 aa4.83□□□□□ -1.64
SMC5-202ENST00000471372 H0YHG0 523 aa4.83□□□□□ -1.64
SMC5-202ENST00000471372 POLR1CO15160 346 aaPredicted RBP4.83□□□□□ -1.64
SMC5-202ENST00000471372 UTS2O95399 124 aa4.83□□□□□ -1.64
SMC5-202ENST00000471372 CSF3P09919 207 aa4.83□□□□□ -1.64
SMC5-202ENST00000471372 FGF8P55075 233 aaPredicted RBP4.83□□□□□ -1.64
SMC5-202ENST00000471372 ATP5J2P56134 94 aa4.83□□□□□ -1.64
SMC5-202ENST00000471372 RIPPLY3P57055 190 aa4.83□□□□□ -1.64
SMC5-202ENST00000471372 MXD1Q05195 221 aa4.83□□□□□ -1.64
SMC5-202ENST00000471372 EOGTQ5NDL2 527 aa4.83□□□□□ -1.64
SMC5-202ENST00000471372 TMEM150AQ86TG1 271 aa4.83□□□□□ -1.64
SMC5-202ENST00000471372 TCAIMQ8N3R3 496 aa4.83□□□□□ -1.64
SMC5-202ENST00000471372 OR51F2Q8NH61 342 aa4.83□□□□□ -1.64
SMC5-202ENST00000471372 CACNG8Q8WXS5 425 aa4.83□□□□□ -1.64
SMC5-202ENST00000471372 CIDECQ96AQ7 238 aaPredicted RBP4.83□□□□□ -1.64
SMC5-202ENST00000471372 P2RX4Q99571 388 aa4.83□□□□□ -1.64
SMC5-202ENST00000471372 IFNKQ9P0W0 207 aa4.83□□□□□ -1.64
SMC5-202ENST00000471372 ZFP92A6NM28 416 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 SLC19A2O60779 497 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 TNFSF13O75888 250 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 ARG1P05089 322 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 CT45A6P0DMU7 189 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 CT45A5P0DMU8 189 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 CT45A7P0DMV0 189 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 CALM1P0DP23 149 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 CALM2P0DP24 149 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 CALM3P0DP25 149 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 ICAM2P13598 275 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 RBMXP38159 391 aaKnown RBP4.82□□□□□ -1.64
SMC5-202ENST00000471372 GPR4P46093 362 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 RND2P52198 227 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 RPS21P63220 83 aaKnown RBP4.82□□□□□ -1.64
SMC5-202ENST00000471372 OR7A5Q15622 319 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 NSDHLQ15738 373 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 CT45A1Q5HYN5 189 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 FHL5Q5TD97 284 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 GTSCR1Q86UQ5 136 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 CT45A3Q8NHU0 189 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 NDNFQ8TB73 568 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 FAM222BQ8WU58 562 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 ASZ1Q8WWH4 475 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 DCUN1D4Q92564 292 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 FOXC2Q99958 501 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 PRRG3Q9BZD7 231 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 DEFB129Q9H1M3 183 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 MTRF1LQ9UGC7 380 aaKnown RBP4.82□□□□□ -1.64
SMC5-202ENST00000471372 NAP1L2Q9ULW6 460 aaPredicted RBP4.82□□□□□ -1.64
SMC5-202ENST00000471372 NEUROG3Q9Y4Z2 214 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 CHD4Q14839 1912 aa4.82□□□□□ -1.64
SMC5-202ENST00000471372 A0A0B4J2A0 478 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 FAM168BA1KXE4 195 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 PSMB11A5LHX3 300 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 SLC22A20A6NK97 555 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 KRTAP4-16G5E9R7 235 aaPredicted RBP4.81□□□□□ -1.64
SMC5-202ENST00000471372 H7C0C1 242 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 YKT6O15498 198 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 BCL2L11O43521 198 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 SRP72O76094 671 aaKnown RBP4.81□□□□□ -1.64
SMC5-202ENST00000471372 DCNP07585 359 aaKnown RBP4.81□□□□□ -1.64
SMC5-202ENST00000471372 HOXB8P17481 243 aaPredicted RBP4.81□□□□□ -1.64
SMC5-202ENST00000471372 CSNK2A2P19784 350 aaPredicted RBP4.81□□□□□ -1.64
SMC5-202ENST00000471372 LCN1P31025 176 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 SERPINB8P50452 374 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 PAGE3Q5JUK9 113 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 CASC10Q5T4H9 136 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 ADNP2Q6IQ32 1131 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 C12orf54Q6X4T0 127 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 LINC00336Q6ZUF6 198 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 LINC00173Q6ZV60 143 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 ARHGAP18Q8N392 663 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 OR1N2Q8NGR9 330 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 OR2A1Q8NGT9 310 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 NEIL3Q8TAT5 605 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 LRRC20Q8TCA0 184 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 UCN3Q969E3 161 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 FAM122AQ96E09 287 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 DYNLL2Q96FJ2 89 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 DNAJC1Q96KC8 554 aaKnown RBP4.81□□□□□ -1.64
SMC5-202ENST00000471372 TSSK3Q96PN8 268 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms