RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 SDAD1Q9NVU7 687 aaKnown RBP eCLIP0.54□□□□□ -2.323e-6■□□□□ 9.7
UBXN4-207ENST00000471246 KLHL28Q9NXS3 571 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 TAS2R3Q9NYW6 316 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 TMOD2Q9NZR1 351 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 KIF3AQ9Y496 699 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 MYO18BQ8IUG5 2567 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 COL6A5A8TX70 2615 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 CDHR2Q9BYE9 1310 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 PDE4DIPQ5VU43 2346 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 ASH1LQ9NR48 2969 aaKnown RBP0.54□□□□□ -2.32
UBXN4-207ENST00000471246 ANKHD1Q8IWZ3 2542 aaKnown RBP0.54□□□□□ -2.32
UBXN4-207ENST00000471246 HECW2Q9P2P5 1572 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 GCN1Q92616 2671 aaKnown RBP0.53□□□□□ -2.32
UBXN4-207ENST00000471246 VWFP04275 2813 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 IGHV1OR15-9A0A0B4J2B8 117 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 A0A1B0GWJ7 208 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 RGSL1A5PLK6 1076 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 ZNF98A6NK75 572 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 CCL21O00585 134 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 ARPC3O15145 178 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 MRPS12O15235 138 aaKnown RBP0.53□□□□□ -2.32
UBXN4-207ENST00000471246 SOCS1O15524 211 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 DEDDO75618 318 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 EIF3GO75821 320 aaKnown RBP eCLIP0.53□□□□□ -2.32
UBXN4-207ENST00000471246 IDH1O75874 414 aaKnown RBP0.53□□□□□ -2.32
UBXN4-207ENST00000471246 SCGNO76038 276 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 CLDN9O95484 217 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 C1orf105O95561 183 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 AIFM1O95831 613 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 IFNB1P01574 187 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 C2P06681 752 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 IQCF3P0C7M6 154 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 ZNF735P0CB33 412 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 RPA2P15927 270 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 DCKP27707 260 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 CASP14P31944 242 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 GDI2P50395 445 aaKnown RBP0.53□□□□□ -2.32
UBXN4-207ENST00000471246 ATP1B3P54709 279 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 NUTF2P61970 127 aaKnown RBP0.53□□□□□ -2.32
UBXN4-207ENST00000471246 RPS11P62280 158 aaKnown RBP eCLIP0.53□□□□□ -2.32
UBXN4-207ENST00000471246 HTD2P86397 168 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 ARHGAP19Q14CB8 494 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 OR4F3Q6IEY1 312 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 OR2A2Q6IF42 318 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 PLET1Q6UQ28 207 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 ASCL5Q7RTU5 278 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 DHDDSQ86SQ9 333 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 TICAM2Q86XR7 235 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 VSTM4Q8IW00 320 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 WDFY1Q8IWB7 410 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 ZNF664Q8N3J9 261 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 TMEM105Q8N8V8 129 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 FAM110BQ8TC76 370 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 SHC3Q92529 594 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 SLC25A46Q96AG3 418 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 ZNF488Q96MN9 340 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 RBM14Q96PK6 669 aaKnown RBP0.53□□□□□ -2.32
UBXN4-207ENST00000471246 PANX2Q96RD6 677 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 TBL1YQ9BQ87 522 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 TCHPQ9BT92 498 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 TPPP3Q9BW30 176 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 ANGPTL4Q9BY76 406 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 PARD6BQ9BYG5 372 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 FRMD8P1Q9BZ68 369 aaPredicted RBP0.53□□□□□ -2.32
UBXN4-207ENST00000471246 RSPH9Q9H1X1 276 aaPredicted RBP0.53□□□□□ -2.32
UBXN4-207ENST00000471246 PPA2Q9H2U2 334 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 OR52D1Q9H346 318 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 C1orf198Q9H425 327 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 FN3KRPQ9HA64 309 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 NMRAL1Q9HBL8 299 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 CDH9Q9ULB4 789 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 SIGLEC7Q9Y286 467 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 TSSC4Q9Y5U2 329 aaPredicted RBP0.53□□□□□ -2.32
UBXN4-207ENST00000471246 BAZ2AQ9UIF9 1905 aaKnown RBP0.53□□□□□ -2.32
UBXN4-207ENST00000471246 ZFHX2Q9C0A1 2572 aaPredicted RBP0.53□□□□□ -2.32
UBXN4-207ENST00000471246 HELZ2Q9BYK8 2649 aaKnown RBP0.53□□□□□ -2.32
UBXN4-207ENST00000471246 GPRASP1Q5JY77 1395 aa0.53□□□□□ -2.32
UBXN4-207ENST00000471246 CCDC168Q8NDH2 2452 aa0.53□□□□□ -2.33
UBXN4-207ENST00000471246 PCNTO95613 3336 aa0.53□□□□□ -2.33
UBXN4-207ENST00000471246 KIAA1109Q2LD37 5005 aa0.53□□□□□ -2.33
UBXN4-207ENST00000471246 ZNF292O60281 2723 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 ZSWIM8A7E2V4 1837 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 PCLOQ9Y6V0 5065 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 ARPC4-TTLL3A0A0A6YYG9 625 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 CENPVL3A0A0U1RRI6 287 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 TMEM120BA0PK00 339 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 F6UB75 175 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 H0YJW9 148 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 K7EQM0 130 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 POLR1CO15160 346 aaPredicted RBP0.52□□□□□ -2.33
UBXN4-207ENST00000471246 HLA-DQB1P01920 261 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 KRT8P05787 483 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 KRT13P13646 458 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 NCK1P16333 377 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 IL1RNP18510 177 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 SSTR5P35346 364 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 HSD17B2P37059 387 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 TNFSF9P41273 254 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 PSMD8P48556 350 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 CCT3P49368 545 aaKnown RBP0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms