RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 RDH16O75452 317 aa8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 SLC34A2O95436 690 aa8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 PMP2P02689 132 aa8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 CRHP06850 196 aa8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 ERCC1P07992 297 aaPredicted RBP8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 ATXN8OSP0DMR3 200 aa8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 GSK3AP49840 483 aa8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 CASP6P55212 293 aa8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 TRA2BP62995 288 aaKnown RBP8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 SQSTM1Q13501 440 aa8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 TRMT12Q53H54 448 aaKnown RBP8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 SLC39A5Q6ZMH5 540 aa8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 ACBD4Q8NC06 268 aa8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 OR6N2Q8NGY6 317 aa8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 ZNF417Q8TAU3 575 aa8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 MS4A6EQ96DS6 147 aa8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 FOXN4Q96NZ1 517 aa8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 SUCNR1Q9BXA5 334 aa8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 OR52A5Q9H2C5 316 aa8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 TMEM100Q9NV29 134 aa8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 CGGBP1Q9UFW8 167 aaPredicted RBP8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 KCNE5Q9UJ90 142 aa8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 COL4A3Q01955 1670 aa8.64□□□□□ -1.03
NHLRC3-203ENST00000470258 TBC1D3DA0A087WVF3 549 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 TBC1D3IA0A087WXS9 549 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 TBC1D3KA0A087X1G2 549 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 TEX13DA0A0J9YY54 714 aaPredicted RBP8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 TBC1D3BA6NDS4 549 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 TBC1D3FA6NER0 549 aaPredicted RBP8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 TBC1D3LB9A6J9 549 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 MBTPS2O43462 519 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 CLEC3AO75596 197 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 IGHV2-5P01817 119 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 DBIP07108 87 aaKnown RBP8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 OR8U9P0C7N5 309 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 TBC1D3HP0C7X1 549 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 NID1P14543 1247 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 SLC22A6Q4U2R8 563 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 DCST2Q5T1A1 773 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 TBC1D3GQ6DHY5 549 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 TBC1D3CQ6IPX1 549 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 ABHD17CQ6PCB6 329 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 PAPD4Q6PIY7 484 aaKnown RBP8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 CLEC9AQ6UXN8 241 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 PARS2Q7L3T8 475 aaKnown RBP8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 CACUL1Q86Y37 369 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 TBC1D3Q8IZP1 549 aaPredicted RBP8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 LINC01555Q8NAE3 123 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 OR10D4PQ8NGN7 298 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 OR8U1Q8NH10 309 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 RNASE11Q8TAA1 199 aaKnown RBP8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 ZCCHC10Q8TBK6 192 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 GPR148Q8TDV2 347 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 NUS1Q96E22 293 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 MARS2Q96GW9 593 aaKnown RBP8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 LURAP1Q96LR2 239 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 SMIM3Q9BZL3 60 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 NRSN2Q9GZP1 204 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 EIF5A2Q9GZV4 153 aaKnown RBP8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 RAB33BQ9H082 229 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 CHRNA9Q9UGM1 479 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 CACFD1Q9UGQ2 172 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 IL36AQ9UHA7 158 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 MRM2Q9UI43 246 aaKnown RBP8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 LAMP5Q9UJQ1 280 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 CACNA1IQ9P0X4 2223 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 LOC100289279A0A1B0GTE1 492 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 GRXCR1A8MXD5 290 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 ADAMTS4O75173 837 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 ZBTB25P24278 435 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 ITGA3P26006 1051 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 HTR5AP47898 357 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 ZNF616Q08AN1 781 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 DUSP8Q13202 625 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 SLC9A3R2Q15599 337 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 EEF1A1P5Q5VTE0 462 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 TMEM244Q5VVB8 128 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 RPL7L1Q6DKI1 246 aaKnown RBP8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 LRRC69Q6ZNQ3 347 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 Q6ZRG5 221 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 ZNF619Q8N2I2 560 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 LRRC25Q8N386 305 aaPredicted RBP8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 JAGN1Q8N5M9 183 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 GVQW1Q8N7I0 195 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 OR2L2Q8NH16 312 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 DTD2Q96FN9 168 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 CASD1Q96PB1 797 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 INSM2Q96T92 566 aaPredicted RBP8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 FAM83CQ9BQN1 747 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 DPEP2Q9H4A9 486 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 PRDM7Q9NQW5 492 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 DCAF16Q9NXF7 216 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 KLF15Q9UIH9 416 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 KCNG2Q9UJ96 466 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 ICAM5Q9UMF0 924 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 AMDHD2Q9Y303 409 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 MMP24Q9Y5R2 645 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 WIF1Q9Y5W5 379 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 FRMPD3Q5JV73 1810 aa8.63□□□□□ -1.03
NHLRC3-203ENST00000470258 A0A087WV62 115 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms