RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 SLC7A8Q9UHI5 535 aa9.93□□□□□ -0.82
CDHR3-205ENST00000468143 FLNAP21333 2647 aaKnown RBP9.92□□□□□ -0.82
CDHR3-205ENST00000468143 LOC100509620A0A075B734 347 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 A0A1W2PPW3 197 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 PRSS37A4D1T9 235 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 C5orf49A4QMS7 147 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 LYNX1G3V0Z9 82 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 OR10H3O60404 316 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 SLC16A7O60669 478 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 MPZL1O95297 269 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 PPP1R3DO95685 299 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 CLPTM1O96005 669 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 LYNX1P0DP58 116 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 DAOP14920 347 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 SLC25A16P16260 332 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 CALB2P22676 271 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 STOMP27105 288 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 UCP2P55851 309 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 PPP2R2BQ00005 443 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 MS4A2Q01362 244 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 PPP1R8Q12972 351 aaKnown RBP9.92□□□□□ -0.82
CDHR3-205ENST00000468143 KRR1Q13601 381 aaKnown RBP9.92□□□□□ -0.82
CDHR3-205ENST00000468143 ENDOGQ14249 297 aaKnown RBP9.92□□□□□ -0.82
CDHR3-205ENST00000468143 GGTLC2Q14390 218 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 KRTAP21-3Q3LHN1 58 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 SPATS1Q496A3 300 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 RGS7BPQ6MZT1 257 aaPredicted RBP9.92□□□□□ -0.82
CDHR3-205ENST00000468143 ZNF774Q6NX45 483 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 SMARCD3Q6STE5 483 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 FOXL2NBQ6ZUU3 175 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 OR1J2Q8NGS2 313 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 CLPTM1LQ96KA5 538 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 ZNF416Q9BWM5 594 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 OR2H1Q9GZK4 316 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 NDEL1Q9GZM8 345 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 WNT5BQ9H1J7 359 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 SYT4Q9H2B2 425 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 LRMDAQ9H2I8 198 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 C1orf198Q9H425 327 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 POLE4Q9NR33 117 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 ACTR3BQ9P1U1 418 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 TMCC3Q9ULS5 477 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 TIMM10BQ9Y5J6 103 aa9.92□□□□□ -0.82
CDHR3-205ENST00000468143 HEATR1Q9H583 2144 aaKnown RBP9.91□□□□□ -0.82
CDHR3-205ENST00000468143 TCRBV5S2A0A599 114 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 VWC2LB2RUY7 222 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 M0R233 179 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 SYNGR3O43761 229 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 STAMBPO95630 424 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 GPANK1O95872 356 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 ERCC1P07992 297 aaPredicted RBP9.91□□□□□ -0.82
CDHR3-205ENST00000468143 CST2P09228 141 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 CSF3P09919 207 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 NAT2P11245 290 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 CTLA4P16410 223 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 MSR1P21757 451 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 USF1P22415 310 aaPredicted RBP9.91□□□□□ -0.82
CDHR3-205ENST00000468143 SDHAP31040 664 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 CDKN2AP42771 156 aaKnown RBP9.91□□□□□ -0.82
CDHR3-205ENST00000468143 RAD52P43351 418 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 CENPAP49450 140 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 EVX1P49640 407 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 GDI2P50395 445 aaKnown RBP9.91□□□□□ -0.82
CDHR3-205ENST00000468143 RPS6KA3P51812 740 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 RPS23P62266 143 aaKnown RBP9.91□□□□□ -0.82
CDHR3-205ENST00000468143 LOXL1Q08397 574 aaPredicted RBP9.91□□□□□ -0.82
CDHR3-205ENST00000468143 TMEM249Q2WGJ8 235 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 RFX4Q33E94 735 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 DPY19L2P2Q6ZN68 376 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 PTCHD4Q6ZW05 846 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 DHFR2Q86XF0 187 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 OR1J1Q8NGS3 322 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 GNPDA2Q8TDQ7 276 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 NEU4Q8WWR8 484 aaPredicted RBP9.91□□□□□ -0.82
CDHR3-205ENST00000468143 C11orf40Q8WZ69 217 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 POM121L2Q96KW2 1035 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 TSSK2Q96PF2 358 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 ERMAPQ96PL5 475 aaPredicted RBP9.91□□□□□ -0.82
CDHR3-205ENST00000468143 PIMREGQ9BSJ6 248 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 NUAK2Q9H093 628 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 OR52D1Q9H346 318 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 SRA1Q9HD15 236 aaKnown RBP9.91□□□□□ -0.82
CDHR3-205ENST00000468143 TAS2R1Q9NYW7 299 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 TAAR3PQ9P1P4 343 aa9.91□□□□□ -0.82
CDHR3-205ENST00000468143 COA3Q9Y2R0 106 aaPredicted RBP9.91□□□□□ -0.82
CDHR3-205ENST00000468143 VPS13CQ709C8 3753 aa9.9□□□□□ -0.82
CDHR3-205ENST00000468143 LOC390937A0A1W2PQ73 354 aa9.9□□□□□ -0.82
CDHR3-205ENST00000468143 C12orf71A8MTZ7 269 aa9.9□□□□□ -0.82
CDHR3-205ENST00000468143 TNFRSF11BO00300 401 aa9.9□□□□□ -0.82
CDHR3-205ENST00000468143 CD5LO43866 347 aa9.9□□□□□ -0.82
CDHR3-205ENST00000468143 KHDRBS3O75525 346 aaKnown RBP9.9□□□□□ -0.82
CDHR3-205ENST00000468143 SNAP29O95721 258 aa9.9□□□□□ -0.82
CDHR3-205ENST00000468143 HPXP02790 462 aa9.9□□□□□ -0.82
CDHR3-205ENST00000468143 FPR3P25089 353 aa9.9□□□□□ -0.82
CDHR3-205ENST00000468143 WNT5AP41221 380 aa9.9□□□□□ -0.82
CDHR3-205ENST00000468143 NR4A2P43354 598 aa9.9□□□□□ -0.82
CDHR3-205ENST00000468143 GLO1Q04760 184 aa9.9□□□□□ -0.82
CDHR3-205ENST00000468143 TRIM25Q14258 630 aaKnown RBP9.9□□□□□ -0.82
CDHR3-205ENST00000468143 SPATA46Q5T0L3 261 aa9.9□□□□□ -0.82
CDHR3-205ENST00000468143 GPR139Q6DWJ6 353 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms