RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 RBM34P42696 430 aaKnown RBP17.45■□□□□ 0.38
COL6A1-203ENST00000466285 RAD52P43351 418 aa17.45■□□□□ 0.38
COL6A1-203ENST00000466285 LCN6P62502 163 aa17.45■□□□□ 0.38
COL6A1-203ENST00000466285 PLP2Q04941 152 aa17.45■□□□□ 0.38
COL6A1-203ENST00000466285 ENDOGQ14249 297 aaKnown RBP17.45■□□□□ 0.38
COL6A1-203ENST00000466285 INTS11Q5TA45 600 aaKnown RBP17.45■□□□□ 0.38
COL6A1-203ENST00000466285 DPPA2Q7Z7J5 298 aa17.45■□□□□ 0.38
COL6A1-203ENST00000466285 LRRC75AQ8NAA5 344 aa17.45■□□□□ 0.38
COL6A1-203ENST00000466285 OR1J2Q8NGS2 313 aa17.45■□□□□ 0.38
COL6A1-203ENST00000466285 ABHD4Q8TB40 342 aa17.45■□□□□ 0.38
COL6A1-203ENST00000466285 KLF14Q8TD94 323 aaPredicted RBP17.45■□□□□ 0.38
COL6A1-203ENST00000466285 LIPHQ8WWY8 451 aa17.45■□□□□ 0.38
COL6A1-203ENST00000466285 OR2H1Q9GZK4 316 aa17.45■□□□□ 0.38
COL6A1-203ENST00000466285 MSL2Q9HCI7 577 aa17.45■□□□□ 0.38
COL6A1-203ENST00000466285 CCNB1IP1Q9NPC3 277 aa17.45■□□□□ 0.38
COL6A1-203ENST00000466285 MAN2C1Q9NTJ4 1040 aa17.45■□□□□ 0.38
COL6A1-203ENST00000466285 ARGLU1Q9NWB6 273 aaPredicted RBP17.45■□□□□ 0.38
COL6A1-203ENST00000466285 A4GNTQ9UNA3 340 aa17.45■□□□□ 0.38
COL6A1-203ENST00000466285 SNX13Q9Y5W8 968 aa17.45■□□□□ 0.38
COL6A1-203ENST00000466285 TMEM89A2RUT3 159 aa17.44■□□□□ 0.38
COL6A1-203ENST00000466285 EGR1P18146 543 aa17.44■□□□□ 0.38
COL6A1-203ENST00000466285 DRD4P21917 467 aa17.44■□□□□ 0.38
COL6A1-203ENST00000466285 ZFP36P26651 326 aaKnown RBP17.44■□□□□ 0.38
COL6A1-203ENST00000466285 SELENOVP59797 346 aa17.44■□□□□ 0.38
COL6A1-203ENST00000466285 SEC61A1P61619 476 aaKnown RBP17.44■□□□□ 0.38
COL6A1-203ENST00000466285 LCN2P80188 198 aa17.44■□□□□ 0.38
COL6A1-203ENST00000466285 LRRC23Q53EV4 343 aaPredicted RBP17.44■□□□□ 0.38
COL6A1-203ENST00000466285 CGB2Q6NT52 195 aa17.44■□□□□ 0.38
COL6A1-203ENST00000466285 ZNF774Q6NX45 483 aa17.44■□□□□ 0.38
COL6A1-203ENST00000466285 ZDHHC22Q8N966 263 aa17.44■□□□□ 0.38
COL6A1-203ENST00000466285 ZNF418Q8TF45 676 aaPredicted RBP17.44■□□□□ 0.38
COL6A1-203ENST00000466285 ZFAND2BQ8WV99 257 aa17.44■□□□□ 0.38
COL6A1-203ENST00000466285 CCL17Q92583 94 aa17.44■□□□□ 0.38
COL6A1-203ENST00000466285 ZNF583Q96ND8 569 aa17.44■□□□□ 0.38
COL6A1-203ENST00000466285 C1QTNF5Q9BXJ0 243 aa17.44■□□□□ 0.38
COL6A1-203ENST00000466285 TMEM120AQ9BXJ8 343 aa17.44■□□□□ 0.38
COL6A1-203ENST00000466285 DECR2Q9NUI1 292 aa17.44■□□□□ 0.38
COL6A1-203ENST00000466285 HIF3AQ9Y2N7 669 aa17.44■□□□□ 0.38
COL6A1-203ENST00000466285 PKD1L1Q8TDX9 2849 aa17.44■□□□□ 0.38
COL6A1-203ENST00000466285 TRAV27A0A087WT01 109 aa17.43■□□□□ 0.38
COL6A1-203ENST00000466285 CENPBD1B2RD01 187 aa17.43■□□□□ 0.38
COL6A1-203ENST00000466285 J3KTA2 159 aa17.43■□□□□ 0.38
COL6A1-203ENST00000466285 ENTPD5O75356 428 aa17.43■□□□□ 0.38
COL6A1-203ENST00000466285 YAP1P46937 504 aaKnown RBP17.43■□□□□ 0.38
COL6A1-203ENST00000466285 COMPP49747 757 aaPredicted RBP17.43■□□□□ 0.38
COL6A1-203ENST00000466285 ERFP50548 548 aa17.43■□□□□ 0.38
COL6A1-203ENST00000466285 CYBRD1Q53TN4 286 aa17.43■□□□□ 0.38
COL6A1-203ENST00000466285 ALG10Q5BKT4 473 aa17.43■□□□□ 0.38
COL6A1-203ENST00000466285 TSPEARQ8WU66 669 aa17.43■□□□□ 0.38
COL6A1-203ENST00000466285 FAM216AQ8WUB2 273 aa17.43■□□□□ 0.38
COL6A1-203ENST00000466285 LRRC58Q96CX6 371 aa17.43■□□□□ 0.38
COL6A1-203ENST00000466285 RAB39BQ96DA2 213 aa17.43■□□□□ 0.38
COL6A1-203ENST00000466285 GAL3ST1Q99999 423 aa17.43■□□□□ 0.38
COL6A1-203ENST00000466285 TXNIPQ9H3M7 391 aa17.43■□□□□ 0.38
COL6A1-203ENST00000466285 VIPAS39Q9H9C1 493 aa17.43■□□□□ 0.38
COL6A1-203ENST00000466285 SMURF2Q9HAU4 748 aa17.43■□□□□ 0.38
COL6A1-203ENST00000466285 EMC7Q9NPA0 242 aa17.43■□□□□ 0.38
COL6A1-203ENST00000466285 RHCGQ9UBD6 479 aa17.43■□□□□ 0.38
COL6A1-203ENST00000466285 TRRAPQ9Y4A5 3859 aa17.43■□□□□ 0.38
COL6A1-203ENST00000466285 A0A0G2JMP0 313 aa17.42■□□□□ 0.38
COL6A1-203ENST00000466285 A0A0X1KG70 313 aa17.42■□□□□ 0.38
COL6A1-203ENST00000466285 ISPDA4D126 451 aa17.42■□□□□ 0.38
COL6A1-203ENST00000466285 PTHP01270 115 aa17.42■□□□□ 0.38
COL6A1-203ENST00000466285 IGHMP01871 453 aa17.42■□□□□ 0.38
COL6A1-203ENST00000466285 IFI30P13284 250 aa17.42■□□□□ 0.38
COL6A1-203ENST00000466285 ZNF26P17031 533 aaPredicted RBP17.42■□□□□ 0.38
COL6A1-203ENST00000466285 GDI2P50395 445 aaKnown RBP17.42■□□□□ 0.38
COL6A1-203ENST00000466285 PPP1CBP62140 327 aa17.42■□□□□ 0.38
COL6A1-203ENST00000466285 HFEQ30201 348 aa17.42■□□□□ 0.38
COL6A1-203ENST00000466285 FAM27BQ5VT28 67 aa17.42■□□□□ 0.38
COL6A1-203ENST00000466285 DCAF12L2Q5VW00 463 aa17.42■□□□□ 0.38
COL6A1-203ENST00000466285 MBNL2Q5VZF2 373 aaKnown RBP17.42■□□□□ 0.38
COL6A1-203ENST00000466285 FOXL2NBQ6ZUU3 175 aa17.42■□□□□ 0.38
COL6A1-203ENST00000466285 OR4M2Q8NGB6 313 aa17.42■□□□□ 0.38
COL6A1-203ENST00000466285 OR13C2Q8NGS9 318 aa17.42■□□□□ 0.38
COL6A1-203ENST00000466285 ELMOD3Q96FG2 381 aa17.42■□□□□ 0.38
COL6A1-203ENST00000466285 UBAP1Q9NZ09 502 aa17.42■□□□□ 0.38
COL6A1-203ENST00000466285 GPR160Q9UJ42 338 aa17.42■□□□□ 0.38
COL6A1-203ENST00000466285 MED31Q9Y3C7 131 aa17.42■□□□□ 0.38
COL6A1-203ENST00000466285 A0A1W2PPL8 197 aa17.41■□□□□ 0.38
COL6A1-203ENST00000466285 NPIPB13A6NJU9 1138 aa17.41■□□□□ 0.38
COL6A1-203ENST00000466285 NPIPB4C9JG80 1138 aa17.41■□□□□ 0.38
COL6A1-203ENST00000466285 MRASO14807 208 aa17.41■□□□□ 0.38
COL6A1-203ENST00000466285 IGF2P01344 180 aa17.41■□□□□ 0.38
COL6A1-203ENST00000466285 FAM209AQ5JX71 171 aa17.41■□□□□ 0.38
COL6A1-203ENST00000466285 Q6ZR03 302 aa17.41■□□□□ 0.38
COL6A1-203ENST00000466285 USP43Q70EL4 1123 aa17.41■□□□□ 0.38
COL6A1-203ENST00000466285 VTCN1Q7Z7D3 282 aa17.41■□□□□ 0.38
COL6A1-203ENST00000466285 OR8J3Q8NGG0 315 aa17.41■□□□□ 0.38
COL6A1-203ENST00000466285 C10orf82Q8WW14 230 aa17.41■□□□□ 0.38
COL6A1-203ENST00000466285 RASSF5Q8WWW0 418 aa17.41■□□□□ 0.38
COL6A1-203ENST00000466285 LRMDAQ9H2I8 198 aa17.41■□□□□ 0.38
COL6A1-203ENST00000466285 MMP26Q9NRE1 261 aa17.41■□□□□ 0.38
COL6A1-203ENST00000466285 BAG5Q9UL15 447 aa17.41■□□□□ 0.38
COL6A1-203ENST00000466285 IMPA2O14732 288 aa17.4■□□□□ 0.38
COL6A1-203ENST00000466285 FFAR1O14842 300 aa17.4■□□□□ 0.38
COL6A1-203ENST00000466285 GCH1P30793 250 aa17.4■□□□□ 0.38
COL6A1-203ENST00000466285 CTXN1P60606 82 aa17.4■□□□□ 0.38
COL6A1-203ENST00000466285 RPL27P61353 136 aaKnown RBP17.4■□□□□ 0.38
COL6A1-203ENST00000466285 KLF10Q13118 480 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms