RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 RACGAP1Q9H0H5 632 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 HMG20AQ9NP66 347 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 OPN4Q9UHM6 478 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 CTNNA3Q9UI47 895 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 ZNF222Q9UK12 451 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 LSM7Q9UK45 103 aaKnown RBP2.47□□□□□ -2.01
LRCH3-211ENST00000466054 CNTNAP1P78357 1384 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 AKNAQ7Z591 1439 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 HEATR9A2RTY3 570 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 CLPXO76031 633 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 SRP72O76094 671 aaKnown RBP2.46□□□□□ -2.02
LRCH3-211ENST00000466054 CLIC3O95833 236 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 UQCRFS1P1P0C7P4 283 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 CEACAM6P40199 344 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 NAA10P41227 235 aaPredicted RBP2.46□□□□□ -2.02
LRCH3-211ENST00000466054 ACLYP53396 1101 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 ESRRGP62508 458 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 HMGN5P82970 282 aaKnown RBP2.46□□□□□ -2.02
LRCH3-211ENST00000466054 Q5W150 140 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 SASS6Q6UVJ0 657 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 Q6ZSR3 168 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 SLC22A9Q8IVM8 553 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 TTC5Q8N0Z6 440 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 OR7G2Q8NG99 324 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 OR10J6PQ8NGY7 276 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 RASD2Q96D21 266 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 PDXPQ96GD0 296 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 CNDP1Q96KN2 507 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 PLIN2Q99541 437 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 ATP5SQ99766 215 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 SYNDIG1Q9H7V2 258 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 FGF20Q9NP95 211 aaPredicted RBP2.46□□□□□ -2.02
LRCH3-211ENST00000466054 FAM49BQ9NUQ9 324 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 ZNRD1Q9P1U0 126 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 UVRAGQ9P2Y5 699 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 TMED5Q9Y3A6 229 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 TMEM14AQ9Y6G1 99 aa2.46□□□□□ -2.02
LRCH3-211ENST00000466054 GLYATL1P3A0A0U1RQE8 302 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 ZNF816-ZNF321PA0A0X1KG74 233 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 SPRR5A0A1B0GTR4 108 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 RP2O75695 350 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 BCHEP06276 602 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 RHOXF2BP0C7M4 288 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 ZNF24P17028 368 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 F2RP25116 425 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 ZNF138P52744 262 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 MXD1Q05195 221 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 MAB21L1Q13394 359 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 STK11Q15831 433 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 ZSCAN26Q16670 478 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 ABCA11PQ4W5N1 156 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 FBXW9Q5XUX1 488 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 BHLHA15Q7RTS1 189 aaPredicted RBP2.45□□□□□ -2.02
LRCH3-211ENST00000466054 PRSS58Q8IYP2 241 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 DEDD2Q8WXF8 326 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 TM4SF18Q96CE8 201 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 ZNF681Q96N22 645 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 ZNF578Q96N58 590 aaPredicted RBP2.45□□□□□ -2.02
LRCH3-211ENST00000466054 LZTS2Q9BRK4 669 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 CENPKQ9BS16 269 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 UBE2ZQ9H832 354 aaPredicted RBP2.45□□□□□ -2.02
LRCH3-211ENST00000466054 NTN4Q9HB63 628 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 KCNJ16Q9NPI9 418 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 SAMSN1Q9NSI8 373 aaKnown RBP2.45□□□□□ -2.02
LRCH3-211ENST00000466054 ZNF355PQ9NSJ1 428 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 KCNE3Q9Y6H6 103 aa2.45□□□□□ -2.02
LRCH3-211ENST00000466054 IGSF9BQ9UPX0 1349 aa2.44□□□□□ -2.02
LRCH3-211ENST00000466054 ZNF716A6NP11 495 aa2.44□□□□□ -2.02
LRCH3-211ENST00000466054 LRRIQ3A6PVS8 624 aaPredicted RBP2.44□□□□□ -2.02
LRCH3-211ENST00000466054 ZNF705GA8MUZ8 300 aaPredicted RBP2.44□□□□□ -2.02
LRCH3-211ENST00000466054 UBXN8O00124 270 aa2.44□□□□□ -2.02
LRCH3-211ENST00000466054 RAB29O14966 203 aa2.44□□□□□ -2.02
LRCH3-211ENST00000466054 DPM1O60762 260 aa2.44□□□□□ -2.02
LRCH3-211ENST00000466054 WBP4O75554 376 aaKnown RBP2.44□□□□□ -2.02
LRCH3-211ENST00000466054 CIB2O75838 187 aa2.44□□□□□ -2.02
LRCH3-211ENST00000466054 VAMP5O95183 116 aa2.44□□□□□ -2.02
LRCH3-211ENST00000466054 SNX4O95219 450 aa2.44□□□□□ -2.02
LRCH3-211ENST00000466054 TSPAN13O95857 204 aa2.44□□□□□ -2.02
LRCH3-211ENST00000466054 ZNF735P0CB33 412 aa2.44□□□□□ -2.02
LRCH3-211ENST00000466054 MAS1LP35410 378 aa2.44□□□□□ -2.02
LRCH3-211ENST00000466054 TMED10P49755 219 aaKnown RBP2.44□□□□□ -2.02
LRCH3-211ENST00000466054 SLC25A11Q02978 314 aaKnown RBP2.44□□□□□ -2.02
LRCH3-211ENST00000466054 IRF4Q15306 451 aa2.44□□□□□ -2.02
LRCH3-211ENST00000466054 SF3A2Q15428 464 aaKnown RBP2.44□□□□□ -2.02
LRCH3-211ENST00000466054 SHHQ15465 462 aa2.44□□□□□ -2.02
LRCH3-211ENST00000466054 XKR7Q5GH72 579 aa2.44□□□□□ -2.02
LRCH3-211ENST00000466054 ARL9Q6T311 187 aa2.44□□□□□ -2.02
LRCH3-211ENST00000466054 NCCRP1Q6ZVX7 275 aaPredicted RBP2.44□□□□□ -2.02
LRCH3-211ENST00000466054 MMAAQ8IVH4 418 aaKnown RBP2.44□□□□□ -2.02
LRCH3-211ENST00000466054 OR2A1Q8NGT9 310 aa2.44□□□□□ -2.02
LRCH3-211ENST00000466054 SLC7A13Q8TCU3 470 aa2.44□□□□□ -2.02
LRCH3-211ENST00000466054 GALNT14Q96FL9 552 aa2.44□□□□□ -2.02
LRCH3-211ENST00000466054 RSPO3Q9BXY4 272 aaPredicted RBP2.44□□□□□ -2.02
LRCH3-211ENST00000466054 UXTQ9UBK9 157 aaPredicted RBP2.44□□□□□ -2.02
LRCH3-211ENST00000466054 CTSFQ9UBX1 484 aa2.44□□□□□ -2.02
LRCH3-211ENST00000466054 SMCO3A2RU48 225 aa2.43□□□□□ -2.02
LRCH3-211ENST00000466054 FAM47DPA6NHR8 397 aa2.43□□□□□ -2.02
LRCH3-211ENST00000466054 AIM2O14862 343 aa2.43□□□□□ -2.02
LRCH3-211ENST00000466054 IGHDP01880 384 aa2.43□□□□□ -2.02
LRCH3-211ENST00000466054 ZNF250P15622 560 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms