RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 EEF1A1P5Q5VTE0 462 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 HBMQ6B0K9 141 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 ABLIM2Q6H8Q1 611 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 NIPAL3Q6P499 406 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 TMEM154Q6P9G4 183 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 DNM1P34Q6PK57 102 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 CRIP3Q6Q6R5 217 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 CREB3L2Q70SY1 520 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 SLC35D2Q76EJ3 337 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 CPOQ8IVL8 374 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 UEVLDQ8IX04 471 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 SPARTQ8N0X7 666 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 IQCF1Q8N6M8 205 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 ATP6V1C2Q8NEY4 427 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 PROKR2Q8NFJ6 384 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 OR5M1Q8NGP8 315 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 OR2T4Q8NH00 348 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 OR2T27Q8NH04 317 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 OR4K13Q8NH42 304 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 OR10D3Q8NH80 312 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 ASB10Q8WXI3 467 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 FCGR1BQ92637 280 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 TMEM45BQ96B21 275 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 SARAFQ96BY9 339 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 NMD3Q96D46 503 aaKnown RBP4.86□□□□□ -1.63
VPS41-211ENST00000466017 SLC25A44Q96H78 314 aaPredicted RBP4.86□□□□□ -1.63
VPS41-211ENST00000466017 TMEM80Q96HE8 168 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 Q96M85 177 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 RBP7Q96R05 134 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 ZNF649Q9BS31 505 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 WACQ9BTA9 647 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 BCO1Q9HAY6 547 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 PAK1IP1Q9NWT1 392 aaPredicted RBP4.86□□□□□ -1.63
VPS41-211ENST00000466017 IL20RAQ9UHF4 553 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 PRSS50Q9UI38 385 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 ING1Q9UK53 422 aaPredicted RBP4.86□□□□□ -1.63
VPS41-211ENST00000466017 DIMT1Q9UNQ2 313 aaKnown RBP4.86□□□□□ -1.63
VPS41-211ENST00000466017 B9D1Q9UPM9 204 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 RCE1Q9Y256 329 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 EXOSC1Q9Y3B2 195 aaKnown RBP4.86□□□□□ -1.63
VPS41-211ENST00000466017 ZNF175Q9Y473 711 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 CSAG2Q9Y5P2 127 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 ACACAQ13085 2346 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 ARPC4-TTLL3A0A0A6YYG9 625 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 TEX13CA0A0J9YWL9 993 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 SLC22A23A1A5C7 686 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 CCDC182A6NF36 153 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 ZNF726A6NNF4 738 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 ZNF716A6NP11 495 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 HSPB2A8KAH6 182 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 PTGES3LE9PB15 166 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 NPIPA5E9PKD4 350 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 XKRYO14609 159 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 TNFSF11O14788 317 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 SMAD9O15198 467 aaKnown RBP4.85□□□□□ -1.63
VPS41-211ENST00000466017 ARHGEF9O43307 516 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 CXCL13O43927 109 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 SYNGR4O95473 234 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 RAB36O95755 333 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 SLPIP03973 132 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 HRGP04196 525 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 STSP08842 583 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 HTR1AP08908 422 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 SBK2P0C263 348 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 PGA4P0DJD7 388 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 PGA3P0DJD8 388 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 VSIG10L2P0DP72 767 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 HLA-DOBP13765 273 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 GABRA1P14867 456 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 ZNF24P17028 368 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 SPI1P17947 270 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 PTNP21246 168 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 SFTPDP35247 375 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 PTGS2P35354 604 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 STARP49675 285 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 CLDN20P56880 219 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 EMX1Q04741 257 aaPredicted RBP4.85□□□□□ -1.63
VPS41-211ENST00000466017 ZNF91Q05481 1191 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 ST3GAL4Q11206 333 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 FOXE3Q13461 319 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 GPR50Q13585 617 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 KRR1Q13601 381 aaKnown RBP4.85□□□□□ -1.63
VPS41-211ENST00000466017 C1DQ13901 141 aaKnown RBP4.85□□□□□ -1.63
VPS41-211ENST00000466017 RNPS1Q15287 305 aaKnown RBP4.85□□□□□ -1.63
VPS41-211ENST00000466017 TBCEQ15813 527 aaPredicted RBP4.85□□□□□ -1.63
VPS41-211ENST00000466017 HSPB2Q16082 182 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 SMN1Q16637 294 aaKnown RBP4.85□□□□□ -1.63
VPS41-211ENST00000466017 PCK2Q16822 640 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 MESTQ5EB52 335 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 RIPPLY2Q5TAB7 128 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 UBE2UQ5VVX9 321 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 PLBD1Q6P4A8 553 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 LEG1Q6P5S2 330 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 SLC25A47Q6Q0C1 308 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 FOXL2NBQ6ZUU3 175 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 RHOUQ7L0Q8 258 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 OR6V1Q8N148 313 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 STX19Q8N4C7 294 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 ACBD7Q8N6N7 88 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 NANOGP1Q8N7R0 232 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms