RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 TPD52L2O43399 206 aaKnown RBP8.24□□□□□ -1.09
USP39-212ENST00000465514 DEAF1O75398 565 aaPredicted RBP8.24□□□□□ -1.09
USP39-212ENST00000465514 F13BP05160 661 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 MMP7P09237 267 aaPredicted RBP8.24□□□□□ -1.09
USP39-212ENST00000465514 DRD4P21917 467 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 KRTAP10-3P60369 221 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 TEKQ02763 1124 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 GLO1Q04760 184 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 TSTQ16762 297 aaKnown RBP8.24□□□□□ -1.09
USP39-212ENST00000465514 NRN1LQ496H8 165 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 BEND6Q5SZJ8 279 aaPredicted RBP8.24□□□□□ -1.09
USP39-212ENST00000465514 AGBL2Q5U5Z8 902 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 USP51Q70EK9 711 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 NANOGNBQ7Z5D8 188 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 PATL1Q86TB9 770 aaKnown RBP8.24□□□□□ -1.09
USP39-212ENST00000465514 RETREG3Q86VR2 466 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 DPP10Q8N608 796 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 CPEB3Q8NE35 698 aaKnown RBP8.24□□□□□ -1.09
USP39-212ENST00000465514 OR1J1Q8NGS3 322 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 FAM110DQ8TAY7 271 aaPredicted RBP8.24□□□□□ -1.09
USP39-212ENST00000465514 MRAPQ8TCY5 172 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 SLC26A7Q8TE54 656 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 TAMM41Q96BW9 452 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 CGREF1Q99674 301 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 GPA33Q99795 319 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 PRSS27Q9BQR3 290 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 ZNF426Q9BUY5 554 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 MRPL13Q9BYD1 178 aaKnown RBP8.24□□□□□ -1.09
USP39-212ENST00000465514 PCDHAC1Q9H158 963 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 RABEP2Q9H5N1 569 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 MEPEQ9NQ76 525 aaPredicted RBP8.24□□□□□ -1.09
USP39-212ENST00000465514 DECR2Q9NUI1 292 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 TRIM33Q9UPN9 1127 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 NDUFAF1Q9Y375 327 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 CACNG2Q9Y698 323 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 DNAH3Q8TD57 4116 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 TANC2Q9HCD6 1990 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 CLDN25C9JDP6 229 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 MCIDASD6RGH6 385 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 ANGPT2O15123 496 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 TRMUO75648 421 aaKnown RBP8.23□□□□□ -1.09
USP39-212ENST00000465514 IGHV3-13P01766 116 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 IGHV2-5P01817 119 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 MT-ND5P03915 603 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 ACADSP16219 412 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 FUT1P19526 365 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 CCNOP22674 350 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 CDAP32320 146 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 APLNRP35414 380 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 ZNF81P51508 661 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 UGT2B15P54855 530 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 HSF2Q03933 536 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 RPL18Q07020 188 aaKnown RBP8.23□□□□□ -1.09
USP39-212ENST00000465514 FAM189A2Q15884 450 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 MOGQ16653 247 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 HFEQ30201 348 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 ARMCX4Q5H9R4 360 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 PABPC1L2AQ5JQF8 200 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 KPRPQ5T749 579 aaPredicted RBP8.23□□□□□ -1.09
USP39-212ENST00000465514 SLC30A8Q8IWU4 369 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 NOXO1Q8NFA2 376 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 OR10A6Q8NH74 314 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 PFN4Q8NHR9 129 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 ASB10Q8WXI3 467 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 RAB1CQ92928 201 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 RAB39BQ96DA2 213 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 THOC1Q96FV9 657 aaKnown RBP8.23□□□□□ -1.09
USP39-212ENST00000465514 SEPHS2Q99611 448 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 KCNN2Q9H2S1 579 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 KAT8Q9H7Z6 458 aaKnown RBP8.23□□□□□ -1.09
USP39-212ENST00000465514 NANOGQ9H9S0 305 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 SIAEQ9HAT2 523 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 BEX1Q9HBH7 125 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 INIPQ9NRY2 104 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 NUP50Q9UKX7 468 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 WIPI2Q9Y4P8 454 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 NOTCH3Q9UM47 2321 aa8.23□□□□□ -1.09
USP39-212ENST00000465514 TET2Q6N021 2002 aaPredicted RBP8.22□□□□□ -1.09
USP39-212ENST00000465514 A0A1B0GUS0 222 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 CENPBD1B2RD01 187 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 SPRY3O43610 288 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 MGRN1O60291 552 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 OR7A10O76100 309 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 SLC2A10O95528 541 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 MT-ND1P03886 318 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 ZNF32P17041 273 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 MAKP20794 623 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 GATA3P23771 443 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 STOMP27105 288 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 MPV17P39210 176 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 AQP2P41181 271 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 WNT5AP41221 380 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 GZMMP51124 257 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 DAP3P51398 398 aaKnown RBP8.22□□□□□ -1.09
USP39-212ENST00000465514 ZNF133P52736 654 aaPredicted RBP8.22□□□□□ -1.09
USP39-212ENST00000465514 CRYBA2P53672 197 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 RAG2P55895 527 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 MRPS34P82930 218 aaKnown RBP8.22□□□□□ -1.09
USP39-212ENST00000465514 NFYCQ13952 458 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 SGCAQ16586 387 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms