RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 FRMPD2BQ6IN97 320 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 SLC8B1Q6J4K2 584 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 C8orf74Q6P047 294 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 ZFP2Q6ZN57 461 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 Q6ZN92 141 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 SNX20Q7Z614 316 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 SLC26A11Q86WA9 606 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 KRT222Q8N1A0 295 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 PQLC3Q8N755 202 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 ZNF707Q96C28 371 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-205ENST00000464541 ITCHQ96J02 903 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 GLT1D1Q96MS3 346 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 MTMR9Q96QG7 549 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 SLC29A1Q99808 456 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 SH3GL1Q99961 368 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 ACBD6Q9BR61 282 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 UQCC2Q9BRT2 126 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 TM6SF2Q9BZW4 377 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 DEFB127Q9H1M4 99 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 RBKSQ9H477 322 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 SIAEQ9HAT2 523 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 DMAP1Q9NPF5 467 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-205ENST00000464541 SLC25A37Q9NYZ2 338 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 CTSFQ9UBX1 484 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 TBX21Q9UL17 535 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 STARD10Q9Y365 291 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 CSDC2Q9Y534 153 aaKnown RBP3.52□□□□□ -1.85
PTCD3-205ENST00000464541 ATP6V1DQ9Y5K8 247 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 SLC25A15Q9Y619 301 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 MYO10Q9HD67 2058 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 INSRP06213 1382 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 RPAP1Q9BWH6 1393 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-205ENST00000464541 FANCIQ9NVI1 1328 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 IGLV4-60A0A075B6I1 120 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 RAB19A4D1S5 217 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 CLOCKO15516 846 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 MED6O75586 246 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 OR2J3O76001 311 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 SMC2O95347 1197 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 ATP1B2P14415 290 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-205ENST00000464541 TUBG1P23258 451 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 STOMP27105 288 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 HOXA9P31269 272 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 S100A5P33763 92 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 SLC26A3P40879 764 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 GPM6AP51674 278 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 EIF4EBP1Q13541 118 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-205ENST00000464541 VAMP3Q15836 100 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 VPS26BQ4G0F5 336 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 LRRC10Q5BKY1 277 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 GPR157Q5UAW9 335 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 ZNF621Q6ZSS3 439 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 RBM45Q8IUH3 476 aaKnown RBP3.51□□□□□ -1.85
PTCD3-205ENST00000464541 NKAIN4Q8IVV8 208 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 CCDC65Q8IXS2 484 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 TMEM61Q8N0U2 210 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 FBXL13Q8NEE6 735 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 DTX3LQ8TDB6 740 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 MCOLN3Q8TDD5 553 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 ACMSDQ8TDX5 336 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 TMEM158Q8WZ71 300 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 LRRC45Q96CN5 670 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 CCDC124Q96CT7 223 aaKnown RBP3.51□□□□□ -1.85
PTCD3-205ENST00000464541 SLC38A2Q96QD8 506 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 MRPL45Q9BRJ2 306 aaKnown RBP3.51□□□□□ -1.85
PTCD3-205ENST00000464541 RIOK2Q9BVS4 552 aaKnown RBP3.51□□□□□ -1.85
PTCD3-205ENST00000464541 NHEJ1Q9H9Q4 299 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-205ENST00000464541 LYRM4Q9HD34 91 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 TUBG2Q9NRH3 451 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 CLCF1Q9UBD9 225 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 SLC7A8Q9UHI5 535 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 TIMM10BQ9Y5J6 103 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 PEX16Q9Y5Y5 336 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 SCN2AQ99250 2005 aa3.51□□□□□ -1.85
PTCD3-205ENST00000464541 GOLGA8QA0A0J9YX86 632 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 SLC31A2O15432 143 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 CBR3O75828 277 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 TBPP20226 339 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 HNRNPH3P31942 346 aaKnown RBP3.5□□□□□ -1.85
PTCD3-205ENST00000464541 NMUP48645 174 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 RAB10P61026 200 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 PSMC5P62195 406 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 PSG5Q15238 335 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 CYTH1Q15438 398 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 KLHL38Q2WGJ6 581 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 PTRHD1Q6GMV3 140 aaKnown RBP3.5□□□□□ -1.85
PTCD3-205ENST00000464541 H3F3CQ6NXT2 135 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 ZNF620Q6ZNG0 422 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 PGAP1Q75T13 922 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 DHDDSQ86SQ9 333 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 MMAAQ8IVH4 418 aaKnown RBP3.5□□□□□ -1.85
PTCD3-205ENST00000464541 OR2L3Q8NG85 312 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 ACOT11Q8WXI4 607 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-205ENST00000464541 NRGNQ92686 78 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 CMTM7Q96FZ5 175 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 FRMD8P1Q9BZ68 369 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-205ENST00000464541 TPK1Q9H3S4 243 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 PSTPIP2Q9H939 334 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 ADAP2Q9NPF8 381 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms