RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 SOX14O95416 240 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 PPP1R3DO95685 299 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 CD8AP01732 235 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 ALPLP05186 524 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 IGFBP1P08833 259 aaPredicted RBP14.79□□□□□ -0.04
VPS52-215ENST00000464425 NR2C1P13056 603 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 CALCRP30988 508 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 TTKP33981 857 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 ALDH3A2P51648 485 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 ZNF133P52736 654 aaPredicted RBP14.79□□□□□ -0.04
VPS52-215ENST00000464425 RAB1AP62820 205 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 ADAM8P78325 824 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 RIPK1Q13546 671 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 DAG1Q14118 895 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 C3orf36Q3SXR2 165 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 C10orf128Q5T292 105 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 SLC25A47Q6Q0C1 308 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 ADCK1Q86TW2 530 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 LRRC18Q8N456 261 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 CBR4Q8N4T8 237 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 EME1Q96AY2 570 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 MS4A3Q96HJ5 214 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 ZNF570Q96NI8 536 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 TSSK6Q9BXA6 273 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 FAIMQ9NVQ4 179 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 CELSR1Q9NYQ6 3014 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 ITPR3Q14573 2671 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 F8P00451 2351 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 TEX13CA0A0J9YWL9 993 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 XKRYO14609 159 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 UBL3O95164 117 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 RAB36O95755 333 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 IGFBP5P24593 272 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 NOS3P29474 1203 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 CDKN1AP38936 164 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 PTH2RP49190 550 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 CRISP1P54107 249 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 CDK5Q00535 292 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 SGCAQ16586 387 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 CLEC12AQ5QGZ9 265 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 THEM4Q5T1C6 240 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 AGAP6Q5VW22 663 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 SLC27A4Q6P1M0 643 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 VHLLQ6RSH7 139 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 ZBTB49Q6ZSB9 765 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 FBXL14Q8N1E6 418 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 LRRC75A-AS1Q8N1F1 130 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 MUC15Q8N387 334 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 WFDC11Q8NEX6 87 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 RASD2Q96D21 266 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 SNX18Q96RF0 628 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 TRAF4Q9BUZ4 470 aaPredicted RBP14.78□□□□□ -0.04
VPS52-215ENST00000464425 RNF121Q9H920 327 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 RNPEPL1Q9HAU8 725 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 C8orf4Q9NR00 106 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 UGT2A1Q9Y4X1 527 aa14.78□□□□□ -0.04
VPS52-215ENST00000464425 PRSS37A4D1T9 235 aa14.77□□□□□ -0.05
VPS52-215ENST00000464425 SOCS2O14508 198 aa14.77□□□□□ -0.05
VPS52-215ENST00000464425 EI24O14681 340 aa14.77□□□□□ -0.05
VPS52-215ENST00000464425 CASQ2O14958 399 aaPredicted RBP14.77□□□□□ -0.05
VPS52-215ENST00000464425 MITFO75030 526 aaPredicted RBP14.77□□□□□ -0.05
VPS52-215ENST00000464425 SLC34A1Q06495 639 aa14.77□□□□□ -0.05
VPS52-215ENST00000464425 KRR1Q13601 381 aaKnown RBP14.77□□□□□ -0.05
VPS52-215ENST00000464425 RAB39AQ14964 217 aa14.77□□□□□ -0.05
VPS52-215ENST00000464425 MESTQ5EB52 335 aa14.77□□□□□ -0.05
VPS52-215ENST00000464425 Q5PR19 223 aa14.77□□□□□ -0.05
VPS52-215ENST00000464425 SLC16A14Q7RTX9 510 aa14.77□□□□□ -0.05
VPS52-215ENST00000464425 KRTAP1-3Q8IUG1 177 aa14.77□□□□□ -0.05
VPS52-215ENST00000464425 OR4Q3Q8NH05 313 aa14.77□□□□□ -0.05
VPS52-215ENST00000464425 ZNF75AQ96N20 296 aa14.77□□□□□ -0.05
VPS52-215ENST00000464425 SLC29A1Q99808 456 aa14.77□□□□□ -0.05
VPS52-215ENST00000464425 GSX2Q9BZM3 304 aa14.77□□□□□ -0.05
VPS52-215ENST00000464425 SLC25A19Q9HC21 320 aa14.77□□□□□ -0.05
VPS52-215ENST00000464425 ZNF701Q9NV72 531 aaPredicted RBP14.77□□□□□ -0.05
VPS52-215ENST00000464425 VSX1Q9NZR4 365 aaPredicted RBP14.77□□□□□ -0.05
VPS52-215ENST00000464425 RRP15Q9Y3B9 282 aaKnown RBP14.77□□□□□ -0.05
VPS52-215ENST00000464425 HIVEP1P15822 2718 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 IGHV2OR16-5A0A0B4J2B6 119 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 SLC22A23A1A5C7 686 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 OVOL3O00110 214 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 HIST1H1CP16403 213 aaKnown RBP14.76□□□□□ -0.05
VPS52-215ENST00000464425 ZNF14P17017 642 aaPredicted RBP14.76□□□□□ -0.05
VPS52-215ENST00000464425 POU1F1P28069 291 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 APOBEC3AP31941 199 aaPredicted RBP14.76□□□□□ -0.05
VPS52-215ENST00000464425 GRK5P34947 590 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 CDKN2AP42771 156 aaKnown RBP14.76□□□□□ -0.05
VPS52-215ENST00000464425 RAD23AP54725 363 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 ATP5J2P56134 94 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 HGFACQ04756 655 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 GINS1Q14691 196 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 PTGES3Q15185 160 aaKnown RBP14.76□□□□□ -0.05
VPS52-215ENST00000464425 TRIP10Q15642 601 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 SLC36A2Q495M3 483 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 ZNF362Q5T0B9 420 aaPredicted RBP14.76□□□□□ -0.05
VPS52-215ENST00000464425 ZNF544Q6NX49 715 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 DTX2Q86UW9 622 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 TGIF2LYQ8IUE0 185 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 TEX12Q9BXU0 123 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 GABARAPL3Q9BY60 117 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 SIAEQ9HAT2 523 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms