RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 TMEM106AQ96A25 262 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 RERGQ96A58 199 aaPredicted RBP6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 TMEM41AQ96HV5 264 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 NECAB3Q96P71 396 aaPredicted RBP6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 ELF4Q99607 663 aaPredicted RBP6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 GFI1Q99684 422 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 SYT4Q9H2B2 425 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 LINC00597Q9H2U6 94 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 SMDT1Q9H4I9 107 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 SYNPO2LQ9H987 977 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 UQCC1Q9NVA1 299 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 CPNE7Q9UBL6 633 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 METTL1Q9UBP6 276 aaKnown RBP6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 LPAR3Q9UBY5 353 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 DPP7Q9UHL4 492 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 DHDHQ9UQ10 334 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 OR1A2Q9Y585 309 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 SLC22A7Q9Y694 548 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 COL4A3Q01955 1670 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 TMEM272A0A1B0GTI8 110 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 ZNF705EA8MWA4 302 aaPredicted RBP6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 C2orf74A8MZ97 194 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 K7ESM1 405 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 SULT2B1O00204 365 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 GPR31O00270 319 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 PAX4O43316 350 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 PRICKLE3O43900 615 aaPredicted RBP6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 UPK3AO75631 287 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 SLC25A12O75746 678 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 FGF18O76093 207 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 IFNA17P01571 189 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 MAS1P04201 325 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 CD3DP04234 171 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 CLUP10909 449 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 ACHEP22303 614 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 ITGB8P26012 769 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 MST1P26927 711 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 PSMB5P28074 263 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 HTR2CP28335 458 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 ECI1P42126 302 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 GLP1RP43220 463 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 SLC6A9P48067 706 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 CAV2P51636 162 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 PGDP52209 483 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 F2RL1P55085 397 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 CLDN12P56749 244 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 RPS4XP62701 263 aaKnown RBP6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 IL13RA1P78552 427 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 OC90Q02509 493 aaPredicted RBP6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 BIKQ13323 160 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 ENPP2Q13822 863 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 GRM7Q14831 915 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 ARL6IP1Q15041 203 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 ZNF77Q15935 545 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 LY6G6FQ5SQ64 297 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 DNLZQ5SXM8 178 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 ATPAF1Q5TC12 328 aaPredicted RBP6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 FHL5Q5TD97 284 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 ARHGAP40Q5TG30 622 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 FCRLBQ6BAA4 426 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 WBP2NLQ6ICG8 309 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 SLC18B1Q6NT16 456 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 LEG1Q6P5S2 330 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 CNKSR3Q6P9H4 555 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 PAPD4Q6PIY7 484 aaKnown RBP6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 OGFOD3Q6PK18 319 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 ZNF704Q6ZNC4 412 aaPredicted RBP6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 ZNF627Q7L945 461 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 KREMEN2Q8NCW0 462 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 OR5AP2Q8NGF4 316 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 OR52E1Q8NGJ3 308 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 PAQR8Q8TEZ7 354 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 HMGB4Q8WW32 186 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 DCUN1D4Q92564 292 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 FAM46BQ96A09 425 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 ARRDC3Q96B67 414 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 SEH1LQ96EE3 360 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 SCLYQ96I15 445 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 C4orf45Q96LM5 186 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 FANCD2OSQ96PS1 177 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 OR5B2Q96R09 309 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 INTS14Q96SY0 518 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 MAP3K3Q99759 626 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 EGLN1Q9GZT9 426 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 TMPRSS5Q9H3S3 457 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 ZNF768Q9H5H4 540 aaKnown RBP6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 XKR8Q9H6D3 395 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 UNKLQ9H9P5 680 aaKnown RBP6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 SEC61A2Q9H9S3 476 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 CHMP1AQ9HD42 196 aaPredicted RBP6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 Q9N2J8 555 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 RAB18Q9NP72 206 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 PARP11Q9NR21 331 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 USP36Q9P275 1121 aaKnown RBP6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 GRHPRQ9UBQ7 328 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 RAB22AQ9UL26 194 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 DAPP1Q9UN19 280 aa6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 MRPS33Q9Y291 106 aaKnown RBP6.5□□□□□ -1.37
CLSTN1-204ENST00000464286 TP53BP1Q12888 1972 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms