RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 FGF11Q92914 225 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 TAAR8Q969N4 342 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 RPL36ALQ969Q0 106 aaKnown RBP6.53□□□□□ -1.36
UBE4B-204ENST00000462658 JSRP1Q96MG2 331 aaPredicted RBP6.53□□□□□ -1.36
UBE4B-204ENST00000462658 COG8Q96MW5 612 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 AGAP4Q96P64 663 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 SLC38A2Q96QD8 506 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 IL4I1Q96RQ9 567 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 POLDIP3Q9BY77 421 aaKnown RBP6.53□□□□□ -1.36
UBE4B-204ENST00000462658 MRPS26Q9BYN8 205 aaKnown RBP6.53□□□□□ -1.36
UBE4B-204ENST00000462658 PRRG3Q9BZD7 231 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 UBQLN3Q9H347 655 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 AAMDCQ9H7C9 122 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 MCCC2Q9HCC0 563 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 CLN6Q9NWW5 311 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 SCN3BQ9NY72 215 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 IL20RAQ9UHF4 553 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 RALYQ9UKM9 306 aaKnown RBP6.53□□□□□ -1.36
UBE4B-204ENST00000462658 BLOC1S6Q9UL45 172 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 TPRKBQ9Y3C4 175 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 ZNF337Q9Y3M9 751 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 URB1O60287 2271 aaKnown RBP6.53□□□□□ -1.36
UBE4B-204ENST00000462658 A0A087WXM4 84 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 A0A087WZY1 265 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 TRIM64A6NGJ6 449 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 PTGES3LE9PB15 166 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 BHLHE40O14503 412 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 ZNF208O43345 1280 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 TLX2O43763 284 aaPredicted RBP6.52□□□□□ -1.37
UBE4B-204ENST00000462658 PRKYO43930 277 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 NPIPB7O75200 414 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 TRIM3O75382 744 aaPredicted RBP6.52□□□□□ -1.37
UBE4B-204ENST00000462658 NEURL1O76050 574 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 NDUFB2O95178 105 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 WDPCPO95876 746 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 CLPTM1O96005 669 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 BGLAPP02818 100 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 HIST1H2ABP04908 130 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 SMIM18P0DKX4 95 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 ATP6V1B1P15313 513 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 DPP4P27487 766 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 SLC6A6P31641 620 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 EIF1P41567 113 aaKnown RBP6.52□□□□□ -1.37
UBE4B-204ENST00000462658 DNASE1L1P49184 302 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 CCL11P51671 97 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 DSCR4P56555 118 aaPredicted RBP6.52□□□□□ -1.37
UBE4B-204ENST00000462658 PRPS1P60891 318 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 EFNB1P98172 346 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 CDC20Q12834 499 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 FHL1Q13642 323 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 OR1C1Q15619 314 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 PGGHGQ32M88 737 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 PLPPR5Q32ZL2 321 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 ANKDD1AQ495B1 522 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 MIDNQ504T8 468 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 C10orf25Q5T742 122 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 C1orf140Q5VVS0 124 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 TIGD3Q6B0B8 471 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 C5orf46Q6UWT4 87 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 HIST3H2AQ7L7L0 130 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 ANKRD13BQ86YJ7 626 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 SLC43A2Q8N370 569 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 ATP6V1C2Q8NEY4 427 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 TMEM163Q8TC26 289 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 KCNE4Q8WWG9 221 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 HIST1H2ACQ93077 130 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 DDIT4LQ96D03 193 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 PLEKHA8Q96JA3 519 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 Q96MT0 163 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 IFT27Q9BW83 186 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 FKRPQ9H9S5 495 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 NANSQ9NR45 359 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 BATF3Q9NR55 127 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 SERINC1Q9NRX5 453 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 PLCXD1Q9NUJ7 323 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 TUBA8Q9NY65 449 aaPredicted RBP6.52□□□□□ -1.37
UBE4B-204ENST00000462658 GPR83Q9NYM4 423 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 CHRNA9Q9UGM1 479 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 ZNF229Q9UJW7 825 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 HEATR5AQ86XA9 2040 aa6.52□□□□□ -1.37
UBE4B-204ENST00000462658 A0A0G2JMM0 328 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 A0A1W2PPB8 328 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 A0A1W2PRS3 328 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 OR5H15A6NDH6 313 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 KIR3DP1A8MWS1 328 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 BLOC1S5-TXNDC5H3BN57 136 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 SURF4O15260 269 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 KLK10O43240 276 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 TLX3O43711 291 aaPredicted RBP6.51□□□□□ -1.37
UBE4B-204ENST00000462658 OR2T1O43869 369 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 EFNA2O43921 213 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 ZIC3O60481 467 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 ENTPD6O75354 484 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 AHSA1O95433 338 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 PPP1R3DO95685 299 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 MT-ATP6P00846 226 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 ASAH2BP0C7U1 165 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 TFPIP10646 304 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 IL11P20809 199 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 TCEA1P23193 301 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms