RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 ERICH5Q6P6B1 374 aa13.1□□□□□ -0.31
SKA3-204ENST00000462482 TSPYL5Q86VY4 417 aaPredicted RBP13.1□□□□□ -0.31
SKA3-204ENST00000462482 NKAIN4Q8IVV8 208 aa13.1□□□□□ -0.31
SKA3-204ENST00000462482 TMEM255BQ8WV15 326 aa13.1□□□□□ -0.31
SKA3-204ENST00000462482 MAGEB18Q96M61 343 aa13.1□□□□□ -0.31
SKA3-204ENST00000462482 DIRC2Q96SL1 478 aa13.1□□□□□ -0.31
SKA3-204ENST00000462482 SEPHS2Q99611 448 aa13.1□□□□□ -0.31
SKA3-204ENST00000462482 NPHS2Q9NP85 383 aa13.1□□□□□ -0.31
SKA3-204ENST00000462482 G6PC2Q9NQR9 355 aa13.1□□□□□ -0.31
SKA3-204ENST00000462482 SVEP1Q4LDE5 3571 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 HTR3EA5X5Y0 456 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 NPIPB13A6NJU9 1138 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 NPIPB4C9JG80 1138 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 SPRY1O43609 319 aaPredicted RBP13.09□□□□□ -0.31
SKA3-204ENST00000462482 IGHV1-46P01743 117 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 CDAP32320 146 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 TOP3AQ13472 1001 aaPredicted RBP13.09□□□□□ -0.31
SKA3-204ENST00000462482 ALG10Q5BKT4 473 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 ARMC4Q5T2S8 1044 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 NANOGP8Q6NSW7 305 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 RBMS3Q6XE24 437 aaKnown RBP13.09□□□□□ -0.31
SKA3-204ENST00000462482 ZER1Q7Z7L7 766 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 AKR7LQ8NHP1 331 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 MOSPD2Q8NHP6 518 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 SGMS2Q8NHU3 365 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 ABHD4Q8TB40 342 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 IPCEF1Q8WWN9 437 aaPredicted RBP13.09□□□□□ -0.31
SKA3-204ENST00000462482 POM121L2Q96KW2 1035 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 ALG12Q9BV10 488 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 TXNIPQ9H3M7 391 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 C7orf69Q9H7B7 122 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 ELOVL3Q9HB03 270 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 UBAP1Q9NZ09 502 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 ZDHHC8Q9ULC8 765 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 TIMM10BQ9Y5J6 103 aa13.09□□□□□ -0.31
SKA3-204ENST00000462482 ANK2Q01484 3957 aa13.08□□□□□ -0.31
SKA3-204ENST00000462482 TMEM89A2RUT3 159 aa13.08□□□□□ -0.32
SKA3-204ENST00000462482 HMGB1P1B2RPK0 211 aaPredicted RBP13.08□□□□□ -0.32
SKA3-204ENST00000462482 H3BSA7 217 aa13.08□□□□□ -0.32
SKA3-204ENST00000462482 DEAF1O75398 565 aaPredicted RBP13.08□□□□□ -0.32
SKA3-204ENST00000462482 MAKP20794 623 aa13.08□□□□□ -0.32
SKA3-204ENST00000462482 TNFSF4P23510 183 aa13.08□□□□□ -0.32
SKA3-204ENST00000462482 COMPP49747 757 aaPredicted RBP13.08□□□□□ -0.32
SKA3-204ENST00000462482 ERVK-25P63136 954 aa13.08□□□□□ -0.32
SKA3-204ENST00000462482 FMODQ06828 376 aa13.08□□□□□ -0.32
SKA3-204ENST00000462482 ST3GAL3Q11203 375 aa13.08□□□□□ -0.32
SKA3-204ENST00000462482 PIN1Q13526 163 aaPredicted RBP13.08□□□□□ -0.32
SKA3-204ENST00000462482 LAPTM4AQ15012 233 aa13.08□□□□□ -0.32
SKA3-204ENST00000462482 FAM27BQ5VT28 67 aa13.08□□□□□ -0.32
SKA3-204ENST00000462482 MBNL2Q5VZF2 373 aaKnown RBP13.08□□□□□ -0.32
SKA3-204ENST00000462482 FAM205BPQ63HN1 556 aa13.08□□□□□ -0.32
SKA3-204ENST00000462482 ZNF771Q7L3S4 317 aaPredicted RBP13.08□□□□□ -0.32
SKA3-204ENST00000462482 OR8J3Q8NGG0 315 aa13.08□□□□□ -0.32
SKA3-204ENST00000462482 SLC25A40Q8TBP6 338 aa13.08□□□□□ -0.32
SKA3-204ENST00000462482 LIPHQ8WWY8 451 aa13.08□□□□□ -0.32
SKA3-204ENST00000462482 GTF3AQ92664 365 aaKnown RBP13.08□□□□□ -0.32
SKA3-204ENST00000462482 HDAC2Q92769 488 aaKnown RBP13.08□□□□□ -0.32
SKA3-204ENST00000462482 MARS2Q96GW9 593 aaKnown RBP13.08□□□□□ -0.32
SKA3-204ENST00000462482 TMPRSS13Q9BYE2 586 aa13.08□□□□□ -0.32
SKA3-204ENST00000462482 OR2J1Q9GZK6 312 aa13.08□□□□□ -0.32
SKA3-204ENST00000462482 A6NIZ1 184 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 TIMM8AO60220 97 aaPredicted RBP13.07□□□□□ -0.32
SKA3-204ENST00000462482 SHOX2O60902 331 aaPredicted RBP13.07□□□□□ -0.32
SKA3-204ENST00000462482 FOXH1O75593 365 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 NPPAP01160 153 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 CST2P09228 141 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 TNFRSF1BP20333 461 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 GSTM3P21266 225 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 LAP3P28838 519 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 MPV17P39210 176 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 WNT5AP41221 380 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 GZMMP51124 257 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 ARFIP2P53365 341 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 RAP1BP61224 184 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 RPL27P61353 136 aaKnown RBP13.07□□□□□ -0.32
SKA3-204ENST00000462482 PPP1CBP62140 327 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 RAP1AP62834 184 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 PSG4Q00888 419 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 MAPRE2Q15555 327 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 LRRC23Q53EV4 343 aaPredicted RBP13.07□□□□□ -0.32
SKA3-204ENST00000462482 TTMPQ5BVD1 217 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 RABL3Q5HYI8 236 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 C1orf229Q6ZS94 237 aaPredicted RBP13.07□□□□□ -0.32
SKA3-204ENST00000462482 ZNF101Q8IZC7 436 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 KLF14Q8TD94 323 aaPredicted RBP13.07□□□□□ -0.32
SKA3-204ENST00000462482 LZICQ8WZA0 190 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 NABP1Q96AH0 204 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 SLC6A7Q99884 636 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 OR2H1Q9GZK4 316 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 NTN4Q9HB63 628 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 C20orf141Q9NUB4 165 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 DDX28Q9NUL7 540 aaKnown RBP13.07□□□□□ -0.32
SKA3-204ENST00000462482 NDRG4Q9ULP0 352 aaKnown RBP13.07□□□□□ -0.32
SKA3-204ENST00000462482 UGT2A1Q9Y4X1 527 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 CACNG2Q9Y698 323 aa13.07□□□□□ -0.32
SKA3-204ENST00000462482 LOC100509620A0A075B734 347 aa13.06□□□□□ -0.32
SKA3-204ENST00000462482 A0A1W2PPL8 197 aa13.06□□□□□ -0.32
SKA3-204ENST00000462482 C12orf71A8MTZ7 269 aa13.06□□□□□ -0.32
SKA3-204ENST00000462482 MRASO14807 208 aa13.06□□□□□ -0.32
SKA3-204ENST00000462482 AVPP01185 164 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms