RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 RAB3DO95716 219 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 C6orf47O95873 294 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 ZDHHC11BP0C7U3 371 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 FOLR1P15328 257 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 RCC1P18754 421 aaPredicted RBP2.17□□□□□ -2.06
VCL-203ENST00000461383 CCNE1P24864 410 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 F2RP25116 425 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 MAS1LP35410 378 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 DRD3P35462 400 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 SLC1A2P43004 574 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 UBE2AP49459 152 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 NCBP2P52298 156 aaKnown RBP eCLIP2.17□□□□□ -2.06
VCL-203ENST00000461383 CRISP1P54107 249 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 HMGCS1Q01581 520 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 SLC25A11Q02978 314 aaKnown RBP2.17□□□□□ -2.06
VCL-203ENST00000461383 ILKQ13418 452 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 TRAM2Q15035 370 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 MPPED2Q15777 294 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 BEX5Q5H9J7 111 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 THEM4Q5T1C6 240 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 PIP5KL1Q5T9C9 394 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 PLCXD3Q63HM9 321 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 CYB5R2Q6BCY4 276 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 ZNF493Q6ZR52 646 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 STRADAQ7RTN6 431 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 TMEM150AQ86TG1 271 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 ZNF429Q86V71 674 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 OR9G4Q8NGQ1 327 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 CD300LFQ8TDQ1 290 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 ASB9Q96DX5 294 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 JSRP1Q96MG2 331 aaPredicted RBP2.17□□□□□ -2.06
VCL-203ENST00000461383 MRPL37Q9BZE1 423 aaKnown RBP2.17□□□□□ -2.06
VCL-203ENST00000461383 UCK2Q9BZX2 261 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 CRLF2Q9HC73 371 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 PXMP2Q9NR77 195 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 ABCB10Q9NRK6 738 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 STOX2Q9P2F5 926 aaPredicted RBP2.17□□□□□ -2.06
VCL-203ENST00000461383 CD84Q9UIB8 345 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 SLC17A4Q9Y2C5 497 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 MRPS18BQ9Y676 258 aaKnown RBP2.17□□□□□ -2.06
VCL-203ENST00000461383 SAR1BQ9Y6B6 198 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 CEMIPQ8WUJ3 1361 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 INSRP06213 1382 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 TRAV25A0A0B4J276 109 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 IGKV6D-41A0A0C4DH26 115 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 A0A1B0GTQ1 180 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 GOLGA6L7A0A1B0GV03 622 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 A0A1B0GW55 424 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 FAM166BA8MTA8 275 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 A8MU10 97 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 L7N2F9 121 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 PES1O00541 588 aaKnown RBP2.16□□□□□ -2.06
VCL-203ENST00000461383 NUPL2O15504 423 aaKnown RBP2.16□□□□□ -2.06
VCL-203ENST00000461383 AIREO43918 545 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 ICOSLGO75144 302 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 RDH16O75452 317 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 CLDN11O75508 207 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 LSM8O95777 96 aaKnown RBP2.16□□□□□ -2.06
VCL-203ENST00000461383 ARG1P05089 322 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 UBCP0CG48 685 aaKnown RBP2.16□□□□□ -2.06
VCL-203ENST00000461383 DUX4L2P0CJ85 424 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 DUX4L3P0CJ86 424 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 DUX4L4P0CJ87 422 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 DUX4L5P0CJ88 424 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 DUX4L6P0CJ89 424 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 DUX4L7P0CJ90 424 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 NR2C1P13056 603 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 CXCL5P42830 114 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 RPS5P46782 204 aaKnown RBP2.16□□□□□ -2.06
VCL-203ENST00000461383 RPS10P46783 165 aaKnown RBP2.16□□□□□ -2.06
VCL-203ENST00000461383 NOVP48745 357 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 ZNF133P52736 654 aaPredicted RBP2.16□□□□□ -2.06
VCL-203ENST00000461383 VSX2P58304 361 aaPredicted RBP2.16□□□□□ -2.06
VCL-203ENST00000461383 SLC7A9P82251 487 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 SP4Q02446 784 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 IFT88Q13099 833 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 DOC2AQ14183 400 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 GINS1Q14691 196 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 OR7A5Q15622 319 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 HADHQ16836 314 aaKnown RBP2.16□□□□□ -2.06
VCL-203ENST00000461383 HSDL1Q3SXM5 330 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 PIGGQ5H8A4 983 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 OR52W1Q6IF63 320 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 DUX4L9Q6RFH8 374 aaPredicted RBP2.16□□□□□ -2.06
VCL-203ENST00000461383 SPESP1Q6UW49 350 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 HDDC2Q7Z4H3 204 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 MKXQ8IYA7 352 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 ARIH2OSQ8N7S6 290 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 OR2A1Q8NGT9 310 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 OR4S2Q8NH73 311 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 OR5K2Q8NHB8 316 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 MARCH1Q8TCQ1 289 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 RNF138Q8WVD3 245 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 FAM210BQ96KR6 192 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 ZYG11BQ9C0D3 744 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 CDC42EP4Q9H3Q1 356 aaKnown RBP2.16□□□□□ -2.06
VCL-203ENST00000461383 PIGUQ9H490 435 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 MRPS30Q9NP92 439 aaKnown RBP2.16□□□□□ -2.06
VCL-203ENST00000461383 AGPAT4Q9NRZ5 378 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 FAM49BQ9NUQ9 324 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms