RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 DUS3LQ96G46 650 aaKnown RBP11.51□□□□□ -0.57
RAB11FIP3-207ENST00000461009 FEVQ99581 238 aa11.51□□□□□ -0.57
RAB11FIP3-207ENST00000461009 REG4Q9BYZ8 158 aa11.51□□□□□ -0.57
RAB11FIP3-207ENST00000461009 SEC61A2Q9H9S3 476 aa11.51□□□□□ -0.57
RAB11FIP3-207ENST00000461009 B3GNT2Q9NY97 397 aa11.51□□□□□ -0.57
RAB11FIP3-207ENST00000461009 NF1P21359 2839 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 IGHV1-18A0A0C4DH31 117 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 VSTM5A8MXK1 200 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 E7EQL1 145 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 RNF223E7ERA6 249 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 KHDRBS3O75525 346 aaKnown RBP11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 TIPRLO75663 272 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 SLC2A10O95528 541 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 PTHP01270 115 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 IGLV1-44P01699 117 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 CD8AP01732 235 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 CRABP1P29762 137 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 APOBEC3AP31941 199 aaPredicted RBP11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 PLP2Q04941 152 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 NPRL3Q12980 569 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 CCNIQ14094 377 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 MESTQ5EB52 335 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 DNM1P34Q6PK57 102 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 CLEC2AQ6UVW9 174 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 MDP1Q86V88 176 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 OR5K1Q8NHB7 308 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 RASD2Q96D21 266 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 NMD3Q96D46 503 aaKnown RBP11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 SH3GL3Q99963 347 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 CACNG6Q9BXT2 260 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 EGLN3Q9H6Z9 239 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 CCNB1IP1Q9NPC3 277 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 VSX1Q9NZR4 365 aaPredicted RBP11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 BAIAP2Q9UQB8 552 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 USF3Q68DE3 2245 aa11.5□□□□□ -0.57
RAB11FIP3-207ENST00000461009 NIPBLQ6KC79 2804 aaeCLIP11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 A0A1W2PPL8 197 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 H7C1C5 153 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 SSX4O60224 188 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 SLC16A7O60669 478 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 IGHV4-39P01824 125 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 CECR9P0C854 216 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 CDKN2AP42771 156 aaKnown RBP11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 GIPRP48546 466 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 PTDSS1P48651 473 aaKnown RBP11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 IDH3GP51553 393 aaPredicted RBP11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 PCBD1P61457 104 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 LCN6P62502 163 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 NAAAQ02083 359 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 FMODQ06828 376 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 ATP6AP1Q15904 470 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 CLEC12AQ5QGZ9 265 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 FAM27BQ5VT28 67 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 ZFP1Q6P2D0 407 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 SHQ1Q6PI26 577 aaKnown RBP11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 TMEM179BQ7Z7N9 219 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 LRRC18Q8N456 261 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 OR4F15Q8NGB8 312 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 DNAJC9Q8WXX5 260 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 UTP4Q969X6 686 aaKnown RBP11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 SNX18Q96RF0 628 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 WACQ9BTA9 647 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 TSSK6Q9BXA6 273 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 C1orf198Q9H425 327 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 RERGLQ9H628 205 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 TBC1D23Q9NUY8 699 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 MOKQ9UQ07 419 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 SPEF1Q9Y4P9 236 aa11.49□□□□□ -0.57
RAB11FIP3-207ENST00000461009 PLCE1Q9P212 2302 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 IGKV1D-43A0A0B4J1Z2 117 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 IQCMA0A1B0GVH7 501 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 C12orf71A8MTZ7 269 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 H3BN98 237 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 CST2P09228 141 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 HIST1H1CP16403 213 aaKnown RBP11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 MSR1P21757 451 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 LAP3P28838 519 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 CDAP32320 146 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 ACTR3P61158 418 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 HSF2Q03933 536 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 SPOCK1Q08629 439 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 SLC35F1Q5T1Q4 408 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 LEG1Q6P5S2 330 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 SYT9Q86SS6 491 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 HIPK1Q86Z02 1210 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 GLB1L2Q8IW92 636 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 ALDH16A1Q8IZ83 802 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 ATG16L2Q8NAA4 619 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 OR2T33Q8NG76 320 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 OR52E2Q8NGJ4 325 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 OR1J2Q8NGS2 313 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 OR4K13Q8NH42 304 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 TEX47Q8TBZ9 253 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 NIPSNAP1Q9BPW8 284 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 TEX12Q9BXU0 123 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 SYT4Q9H2B2 425 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 SRA1Q9HD15 236 aaKnown RBP11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 ZNF224Q9NZL3 707 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 KIF17Q9P2E2 1029 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 GDF2Q9UK05 429 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms