RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 NOS3P29474 1203 aa17.86■□□□□ 0.45
RPUSD3-210ENST00000460909 DBPQ10586 325 aaPredicted RBP17.86■□□□□ 0.45
RPUSD3-210ENST00000460909 ENDOGQ14249 297 aaKnown RBP17.86■□□□□ 0.45
RPUSD3-210ENST00000460909 SLC36A3Q495N2 470 aa17.86■□□□□ 0.45
RPUSD3-210ENST00000460909 TMEM53Q6P2H8 277 aa17.86■□□□□ 0.45
RPUSD3-210ENST00000460909 FAHD1Q6P587 224 aa17.86■□□□□ 0.45
RPUSD3-210ENST00000460909 OR6V1Q8N148 313 aa17.86■□□□□ 0.45
RPUSD3-210ENST00000460909 SDR9C7Q8NEX9 313 aa17.86■□□□□ 0.45
RPUSD3-210ENST00000460909 OR52E2Q8NGJ4 325 aa17.86■□□□□ 0.45
RPUSD3-210ENST00000460909 LRTOMTQ8WZ04 291 aa17.86■□□□□ 0.45
RPUSD3-210ENST00000460909 FOXN4Q96NZ1 517 aa17.86■□□□□ 0.45
RPUSD3-210ENST00000460909 FOXC2Q99958 501 aa17.86■□□□□ 0.45
RPUSD3-210ENST00000460909 BEX4Q9NWD9 120 aaPredicted RBP17.86■□□□□ 0.45
RPUSD3-210ENST00000460909 ITGB1BP2Q9UKP3 347 aa17.86■□□□□ 0.45
RPUSD3-210ENST00000460909 FBXL3Q9UKT7 428 aa17.86■□□□□ 0.45
RPUSD3-210ENST00000460909 LAMP3Q9UQV4 416 aa17.86■□□□□ 0.45
RPUSD3-210ENST00000460909 ATP23Q9Y6H3 246 aa17.86■□□□□ 0.45
RPUSD3-210ENST00000460909 RTTNQ86VV8 2226 aa17.86■□□□□ 0.45
RPUSD3-210ENST00000460909 MSR1P21757 451 aa17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 CRABP1P29762 137 aa17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 PRRC2AP48634 2157 aaKnown RBP17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 ARHGDIAP52565 204 aa17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 UGT2A3Q6UWM9 527 aa17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 AMIGO2Q86SJ2 522 aa17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 DTX2Q86UW9 622 aa17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 ZBTB46Q86UZ6 589 aa17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 JAZF1Q86VZ6 243 aa17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 GLB1L2Q8IW92 636 aa17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 OR2T33Q8NG76 320 aa17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 OR5K1Q8NHB7 308 aa17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 PYDC1Q8WXC3 89 aa17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 KCNS3Q9BQ31 491 aa17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 ZNF416Q9BWM5 594 aa17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 RNF121Q9H920 327 aa17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 EMC7Q9NPA0 242 aa17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 B9D1Q9UPM9 204 aa17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 BAIAP2Q9UQB8 552 aa17.85■□□□□ 0.45
RPUSD3-210ENST00000460909 H3BNX3 289 aa17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 OVOL3O00110 214 aa17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 MPZL1O95297 269 aa17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 RENP00797 406 aa17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 FCGR1AP12314 374 aa17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 TTKP33981 857 aa17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 GUCA1AP43080 201 aaPredicted RBP17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 DAPP51397 102 aa17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 ART1P52961 327 aa17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 NKX6-1P78426 367 aaPredicted RBP17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 PSG4Q00888 419 aa17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 KCNMB1Q16558 191 aa17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 ZNF544Q6NX49 715 aa17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 CPEB3Q8NE35 698 aaKnown RBP17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 NUP37Q8NFH4 326 aa17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 OR4F15Q8NGB8 312 aa17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 BDH2Q9BUT1 245 aa17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 TRAF4Q9BUZ4 470 aaPredicted RBP17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 GRIP2Q9C0E4 1043 aa17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 RACGAP1Q9H0H5 632 aa17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 KCNN2Q9H2S1 579 aa17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 RERGLQ9H628 205 aa17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 SRA1Q9HD15 236 aaKnown RBP17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 RPRD1BQ9NQG5 326 aaKnown RBP17.84■□□□□ 0.45
RPUSD3-210ENST00000460909 VPS13CQ709C8 3753 aa17.83■□□□□ 0.45
RPUSD3-210ENST00000460909 TMCC2O75069 709 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 GPANK1O95872 356 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 GAAP10253 952 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 OSMP13725 252 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 PABPC1L2AQ5JQF8 200 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 OTPQ5XKR4 325 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 C11orf71Q6IPW1 123 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 DNM1P34Q6PK57 102 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 SYT9Q86SS6 491 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 ATG16L2Q8NAA4 619 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 CYB561A3Q8NBI2 242 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 TEX47Q8TBZ9 253 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 TMEM171Q8WVE6 324 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 RBM4Q9BWF3 364 aaKnown RBP17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 FN3KQ9H479 309 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 ZNF556Q9HAH1 456 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 CCNB1IP1Q9NPC3 277 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 CA10Q9NS85 328 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 FAIMQ9NVQ4 179 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 FKBP7Q9Y680 259 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 ARID1AO14497 2285 aa17.83■□□□□ 0.44
RPUSD3-210ENST00000460909 USF3Q68DE3 2245 aa17.82■□□□□ 0.44
RPUSD3-210ENST00000460909 G3V2T6 193 aa17.82■□□□□ 0.44
RPUSD3-210ENST00000460909 H3BN98 237 aa17.82■□□□□ 0.44
RPUSD3-210ENST00000460909 PAX1P15863 534 aa17.82■□□□□ 0.44
RPUSD3-210ENST00000460909 NR4A1P22736 598 aa17.82■□□□□ 0.44
RPUSD3-210ENST00000460909 APOBEC3AP31941 199 aaPredicted RBP17.82■□□□□ 0.44
RPUSD3-210ENST00000460909 FABP6P51161 128 aa17.82■□□□□ 0.44
RPUSD3-210ENST00000460909 LSM6P62312 80 aaKnown RBP17.82■□□□□ 0.44
RPUSD3-210ENST00000460909 ACSM5Q6NUN0 579 aa17.82■□□□□ 0.44
RPUSD3-210ENST00000460909 HIPK1Q86Z02 1210 aa17.82■□□□□ 0.44
RPUSD3-210ENST00000460909 MUC15Q8N387 334 aa17.82■□□□□ 0.44
RPUSD3-210ENST00000460909 PAQR4Q8N4S7 273 aaPredicted RBP17.82■□□□□ 0.44
RPUSD3-210ENST00000460909 IQCF1Q8N6M8 205 aa17.82■□□□□ 0.44
RPUSD3-210ENST00000460909 SLC37A3Q8NCC5 494 aa17.82■□□□□ 0.44
RPUSD3-210ENST00000460909 SLC30A7Q8NEW0 376 aa17.82■□□□□ 0.44
RPUSD3-210ENST00000460909 DNAJC9Q8WXX5 260 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms