RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 PABPC1L2AQ5JQF8 200 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 ELFN2Q5R3F8 820 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 ZNF730Q6ZMV8 503 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 TREML1Q86YW5 311 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 LINC01356Q8N9X3 169 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 TMEM158Q8WZ71 300 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 FAM162AQ96A26 154 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 POM121L2Q96KW2 1035 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 DHRS1Q96LJ7 313 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 COG8Q96MW5 612 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 DIRC2Q96SL1 478 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 GPX7Q96SL4 187 aaPredicted RBP8.58□□□□□ -1.04
HDLBP-228ENST00000459788 RACGAP1Q9H0H5 632 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 NMNAT1Q9HAN9 279 aaPredicted RBP8.58□□□□□ -1.04
HDLBP-228ENST00000459788 ELOVL3Q9HB03 270 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 DCAF13Q9NV06 445 aaKnown RBP8.58□□□□□ -1.04
HDLBP-228ENST00000459788 NDE1Q9NXR1 346 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 EIF3KQ9UBQ5 218 aaKnown RBP8.58□□□□□ -1.04
HDLBP-228ENST00000459788 ATPIF1Q9UII2 106 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 NDRG4Q9ULP0 352 aaKnown RBP8.58□□□□□ -1.04
HDLBP-228ENST00000459788 CUBNO60494 3623 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 DOCK11Q5JSL3 2073 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 SVEP1Q4LDE5 3571 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 DNHD1Q96M86 4753 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 A0A1W2PPW3 197 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 SH3PXD2BA1X283 911 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 B4DSR2 109 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 XKRYO14609 159 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 SNX3O60493 162 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 PTP4A3O75365 173 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 NDUFB2O95178 105 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 SLC2A10O95528 541 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 LCKP06239 509 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 H1F0P07305 194 aaKnown RBP8.57□□□□□ -1.04
HDLBP-228ENST00000459788 PATE4P0C8F1 98 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 HSD17B1P14061 328 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 ZNF16P17020 682 aaPredicted RBP8.57□□□□□ -1.04
HDLBP-228ENST00000459788 ZNF32P17041 273 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 GDI2P50395 445 aaKnown RBP8.57□□□□□ -1.04
HDLBP-228ENST00000459788 DVL1P1P54792 670 aaPredicted RBP8.57□□□□□ -1.04
HDLBP-228ENST00000459788 CDH15P55291 814 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 MYBPC1Q00872 1141 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 SCRN3Q0VDG4 424 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 NKPD1Q17RQ9 610 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 ZMAT1Q5H9K5 638 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 MBNL2Q5VZF2 373 aaKnown RBP8.57□□□□□ -1.04
HDLBP-228ENST00000459788 GLYATQ6IB77 296 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 TMEM154Q6P9G4 183 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 PGM2L1Q6PCE3 622 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 ZER1Q7Z7L7 766 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 ADCK1Q86TW2 530 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 TEX29Q8N6K0 151 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 CPEB3Q8NE35 698 aaKnown RBP8.57□□□□□ -1.04
HDLBP-228ENST00000459788 SLC7A13Q8TCU3 470 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 POP5Q969H6 163 aaKnown RBP8.57□□□□□ -1.04
HDLBP-228ENST00000459788 TSPAN32Q96QS1 320 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 SNX18Q96RF0 628 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 MDFIQ99750 246 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 ELAC2Q9BQ52 826 aaKnown RBP8.57□□□□□ -1.04
HDLBP-228ENST00000459788 SYT3Q9BQG1 590 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 OR2H1Q9GZK4 316 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 HINT3Q9NQE9 182 aaKnown RBP8.57□□□□□ -1.04
HDLBP-228ENST00000459788 GRHPRQ9UBQ7 328 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 DUSP13Q9UII6 198 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 SNX13Q9Y5W8 968 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 DYSFO75923 2080 aa8.57□□□□□ -1.04
HDLBP-228ENST00000459788 TRAV27A0A087WT01 109 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 PRSS37A4D1T9 235 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 J3KTA2 159 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 IMPA2O14732 288 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 PIP5K1CO60331 668 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 TXNDC12O95881 172 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 TGFAP01135 160 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 ANPEPP15144 967 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 SRD5A1P18405 259 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 DRD4P21917 467 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 IGFBP5P24593 272 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 APEX1P27695 318 aaKnown RBP8.56□□□□□ -1.04
HDLBP-228ENST00000459788 GCH1P30793 250 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 SDHAP31040 664 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 RPL4P36578 427 aaKnown RBP8.56□□□□□ -1.04
HDLBP-228ENST00000459788 CRYBB2P43320 205 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 ALDH3B1P43353 468 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 GPR6P46095 362 aaPredicted RBP8.56□□□□□ -1.04
HDLBP-228ENST00000459788 LIMS1P48059 325 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 MNAT1P51948 309 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 ARHGDIAP52565 204 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 LSM6P62312 80 aaKnown RBP8.56□□□□□ -1.04
HDLBP-228ENST00000459788 PSG4Q00888 419 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 FMODQ06828 376 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 SCGB2A2Q13296 93 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 KRT72Q14CN4 511 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 SGCAQ16586 387 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 FAM120AOSQ5T036 256 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 DPY19L2P2Q6ZN68 376 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 FAM122BQ7Z309 247 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 CPLX4Q7Z7G2 160 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 LRP11Q86VZ4 500 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 ZCCHC24Q8N2G6 241 aaKnown RBP8.56□□□□□ -1.04
HDLBP-228ENST00000459788 LRRC18Q8N456 261 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms