RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 RIMS3Q9UJD0 308 aa18.29■□□□□ 0.52
CPNE1-220ENST00000458038 SH3GLB1Q9Y371 365 aa18.29■□□□□ 0.52
CPNE1-220ENST00000458038 PPIAL4EA0A075B759 164 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 PPIAL4CA0A0B4J2A2 164 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 C5orf49A4QMS7 147 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 PPIAL4DF5H284 164 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 IFNA14P01570 189 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 IGHV1-46P01743 117 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 PPIAL4FP0DN26 164 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 ZNF32P17041 273 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 PCBD1P61457 104 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 SGCAQ16586 387 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 THEM4Q5T1C6 240 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 TMEM239Q8WW34 195 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 CCL17Q92583 94 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 NMD3Q96D46 503 aaKnown RBP18.28■□□□□ 0.52
CPNE1-220ENST00000458038 ATP6V1G3Q96LB4 118 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 RBP7Q96R05 134 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 GAL3ST1Q99999 423 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 ALG12Q9BV10 488 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 TXNIPQ9H3M7 391 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 C7orf69Q9H7B7 122 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 ELOVL3Q9HB03 270 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 NTN4Q9HB63 628 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 MED31Q9Y3C7 131 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 UGT2A1Q9Y4X1 527 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 PKD1L1Q8TDX9 2849 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 TANC2Q9HCD6 1990 aa18.28■□□□□ 0.52
CPNE1-220ENST00000458038 ICMTO60725 284 aa18.27■□□□□ 0.52
CPNE1-220ENST00000458038 RGS9O75916 674 aaPredicted RBP18.27■□□□□ 0.52
CPNE1-220ENST00000458038 CDAP32320 146 aa18.27■□□□□ 0.52
CPNE1-220ENST00000458038 GZMMP51124 257 aa18.27■□□□□ 0.52
CPNE1-220ENST00000458038 GLO1Q04760 184 aa18.27■□□□□ 0.52
CPNE1-220ENST00000458038 CD47Q08722 323 aa18.27■□□□□ 0.52
CPNE1-220ENST00000458038 METTL21CQ5VZV1 264 aa18.27■□□□□ 0.52
CPNE1-220ENST00000458038 ARL9Q6T311 187 aa18.27■□□□□ 0.52
CPNE1-220ENST00000458038 ZER1Q7Z7L7 766 aa18.27■□□□□ 0.52
CPNE1-220ENST00000458038 NKAIN4Q8IVV8 208 aa18.27■□□□□ 0.52
CPNE1-220ENST00000458038 KLF14Q8TD94 323 aaPredicted RBP18.27■□□□□ 0.52
CPNE1-220ENST00000458038 TMEM255BQ8WV15 326 aa18.27■□□□□ 0.52
CPNE1-220ENST00000458038 GTF3AQ92664 365 aaKnown RBP18.27■□□□□ 0.52
CPNE1-220ENST00000458038 NABP1Q96AH0 204 aa18.27■□□□□ 0.52
CPNE1-220ENST00000458038 SIKE1Q9BRV8 207 aa18.27■□□□□ 0.52
CPNE1-220ENST00000458038 MRGBPQ9NV56 204 aa18.27■□□□□ 0.52
CPNE1-220ENST00000458038 LOC100509620A0A075B734 347 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 SPRY3O43610 288 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 UBOX5O94941 541 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 SLC2A10O95528 541 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 NPPAP01160 153 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 EGR1P18146 543 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 TUBG1P23258 451 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 WNT5AP41221 380 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 ARHGDIAP52565 204 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 CRYBA2P53672 197 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 PSG4Q00888 419 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 FAM205BPQ63HN1 556 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 NANOGP8Q6NSW7 305 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 SLC25A47Q6Q0C1 308 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 ZNF101Q8IZC7 436 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 PFN4Q8NHR9 129 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 SLC25A40Q8TBP6 338 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 ST7LQ8TDW4 575 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 IPCEF1Q8WWN9 437 aaPredicted RBP18.26■□□□□ 0.51
CPNE1-220ENST00000458038 ECSITQ9BQ95 431 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 TUBG2Q9NRH3 451 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 INTS9Q9NV88 658 aaKnown RBP18.26■□□□□ 0.51
CPNE1-220ENST00000458038 KLHL21Q9UJP4 597 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 TIMM10BQ9Y5J6 103 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 CACNG2Q9Y698 323 aa18.26■□□□□ 0.51
CPNE1-220ENST00000458038 FOXH1O75593 365 aa18.25■□□□□ 0.51
CPNE1-220ENST00000458038 CD55P08174 381 aa18.25■□□□□ 0.51
CPNE1-220ENST00000458038 CST2P09228 141 aa18.25■□□□□ 0.51
CPNE1-220ENST00000458038 MAKP20794 623 aa18.25■□□□□ 0.51
CPNE1-220ENST00000458038 MPV17P39210 176 aa18.25■□□□□ 0.51
CPNE1-220ENST00000458038 PPP1CBP62140 327 aa18.25■□□□□ 0.51
CPNE1-220ENST00000458038 LAPTM4AQ15012 233 aa18.25■□□□□ 0.51
CPNE1-220ENST00000458038 ERICH5Q6P6B1 374 aa18.25■□□□□ 0.51
CPNE1-220ENST00000458038 OR8J3Q8NGG0 315 aa18.25■□□□□ 0.51
CPNE1-220ENST00000458038 AKR7LQ8NHP1 331 aa18.25■□□□□ 0.51
CPNE1-220ENST00000458038 MOSPD2Q8NHP6 518 aa18.25■□□□□ 0.51
CPNE1-220ENST00000458038 HDAC2Q92769 488 aaKnown RBP18.25■□□□□ 0.51
CPNE1-220ENST00000458038 SLC6A7Q99884 636 aa18.25■□□□□ 0.51
CPNE1-220ENST00000458038 WACQ9BTA9 647 aa18.25■□□□□ 0.51
CPNE1-220ENST00000458038 OR2J1Q9GZK6 312 aa18.25■□□□□ 0.51
CPNE1-220ENST00000458038 C20orf141Q9NUB4 165 aa18.25■□□□□ 0.51
CPNE1-220ENST00000458038 HIF3AQ9Y2N7 669 aa18.25■□□□□ 0.51
CPNE1-220ENST00000458038 FSHBP01225 129 aa18.24■□□□□ 0.51
CPNE1-220ENST00000458038 ADRA2CP18825 462 aa18.24■□□□□ 0.51
CPNE1-220ENST00000458038 IFNA8P32881 189 aa18.24■□□□□ 0.51
CPNE1-220ENST00000458038 RPL27P61353 136 aaKnown RBP18.24■□□□□ 0.51
CPNE1-220ENST00000458038 ERVK-25P63136 954 aa18.24■□□□□ 0.51
CPNE1-220ENST00000458038 PIN1Q13526 163 aaPredicted RBP18.24■□□□□ 0.51
CPNE1-220ENST00000458038 ALG10Q5BKT4 473 aa18.24■□□□□ 0.51
CPNE1-220ENST00000458038 SPATA46Q5T0L3 261 aa18.24■□□□□ 0.51
CPNE1-220ENST00000458038 SYT9Q86SS6 491 aa18.24■□□□□ 0.51
CPNE1-220ENST00000458038 CALHM3Q86XJ0 350 aa18.24■□□□□ 0.51
CPNE1-220ENST00000458038 ABHD4Q8TB40 342 aa18.24■□□□□ 0.51
CPNE1-220ENST00000458038 NSMAFQ92636 917 aa18.24■□□□□ 0.51
CPNE1-220ENST00000458038 MAGEB18Q96M61 343 aa18.24■□□□□ 0.51
CPNE1-220ENST00000458038 OR2H1Q9GZK4 316 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms