RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 CRATP43155 626 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 THBS3P49746 956 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 CDH13P55290 713 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 SKP2Q13309 424 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 NAB1Q13506 487 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 TMEM255AQ5JRV8 349 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 PHYHD1Q5SRE7 291 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 IL23RQ5VWK5 629 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 TMEM225Q6GV28 225 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 NOXRED1Q6NXP6 359 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 METAP1DQ6UB28 335 aaPredicted RBP4.97□□□□□ -1.61
COMMD3-204ENST00000456711 EPHX4Q8IUS5 362 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 GPR137CQ8N3F9 429 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 C11orf42Q8N5U0 333 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 C1orf52Q8N6N3 182 aaKnown RBP4.97□□□□□ -1.61
COMMD3-204ENST00000456711 ZNF614Q8N883 585 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 ICA1LQ8NDH6 482 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 VANGL1Q8TAA9 524 aaPredicted RBP4.97□□□□□ -1.61
COMMD3-204ENST00000456711 CDKL2Q92772 493 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 MYDGFQ969H8 173 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 CFAP36Q96G28 342 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 FRG2BQ96QU4 278 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 BTBD2Q9BX70 525 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 SLC19A3Q9BZV2 496 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 GLIPR2Q9H4G4 154 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 RNF121Q9H920 327 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 POPDC3Q9HBV1 291 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 GIN1Q9NXP7 522 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 NUDT4Q9NZJ9 180 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 B3GAT1Q9P2W7 334 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 PCDHGB4Q9UN71 923 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 PPP1R3CQ9UQK1 317 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 CHMP2BQ9UQN3 213 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 ZNF256Q9Y2P7 627 aaPredicted RBP4.97□□□□□ -1.61
COMMD3-204ENST00000456711 DTNAQ9Y4J8 743 aa4.97□□□□□ -1.61
COMMD3-204ENST00000456711 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 A0A1B0GVY2 172 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 TCRBV9S1A1TA0A576 114 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 SMIM23A6NLE4 172 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 NPIPB9F8W1W9 429 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 F2RL2O00254 374 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 NPFFO15130 113 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 LDLRAD4O15165 306 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 BANF1O75531 89 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 WISP3O95389 354 aaPredicted RBP4.96□□□□□ -1.62
COMMD3-204ENST00000456711 FSTL3O95633 263 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 SNAP29O95721 258 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 OTCP00480 354 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 INHBAP08476 426 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 CCL2P13500 99 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 TSPAN8P19075 237 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 CCNA2P20248 432 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 ATP6V1C1P21283 382 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 EEF1B2P24534 225 aaKnown RBP4.96□□□□□ -1.62
COMMD3-204ENST00000456711 SSTR1P30872 391 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 NPY4RP50391 375 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 SERPINB9P50453 376 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 LUMP51884 338 aaPredicted RBP4.96□□□□□ -1.62
COMMD3-204ENST00000456711 ATP12AP54707 1039 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 ATP6V0D1P61421 351 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 ARF6P62330 175 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 POU6F2P78424 691 aaPredicted RBP4.96□□□□□ -1.62
COMMD3-204ENST00000456711 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.96□□□□□ -1.62
COMMD3-204ENST00000456711 MGAT5Q09328 741 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 ILF2Q12905 390 aaKnown RBP4.96□□□□□ -1.62
COMMD3-204ENST00000456711 IFT88Q13099 833 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 FRG1Q14331 258 aaKnown RBP4.96□□□□□ -1.62
COMMD3-204ENST00000456711 FASTKD3Q14CZ7 662 aaKnown RBP4.96□□□□□ -1.62
COMMD3-204ENST00000456711 ZNF718Q3SXZ3 478 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 ZNF404Q494X3 552 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 SPANXN3Q5MJ09 141 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 TTC19Q6DKK2 380 aaPredicted RBP4.96□□□□□ -1.62
COMMD3-204ENST00000456711 CDC73Q6P1J9 531 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 ZNF813Q6ZN06 617 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 GRINAQ7Z429 371 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 VMO1Q7Z5L0 202 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 VRK2Q86Y07 508 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 CTAGE3PQ8IX95 158 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 COX18Q8N8Q8 333 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 SLC30A7Q8NEW0 376 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 OR51D1Q8NGF3 324 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 OR1J1Q8NGS3 322 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 PMM1Q92871 262 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 DDIT4LQ96D03 193 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 GIMAP5Q96F15 307 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 CERS2Q96G23 380 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 SPATA5L1Q9BVQ7 753 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 CDCA4Q9BXL8 241 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 KRTAP4-4Q9BYR3 166 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 IPPKQ9H8X2 491 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 CDH20Q9HBT6 801 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 TCF7L2Q9NQB0 619 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 NSMCE4AQ9NXX6 385 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 TXNDC16Q9P2K2 825 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 PSMC3IPQ9P2W1 217 aaPredicted RBP4.96□□□□□ -1.62
COMMD3-204ENST00000456711 LGALS13Q9UHV8 139 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 GLS2Q9UI32 602 aa4.96□□□□□ -1.62
COMMD3-204ENST00000456711 NDRG4Q9ULP0 352 aaKnown RBP4.96□□□□□ -1.62
COMMD3-204ENST00000456711 A0A1B0GVI7 797 aa4.95□□□□□ -1.62
COMMD3-204ENST00000456711 MEIOCA2RUB1 952 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms