RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 RAB39AQ14964 217 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 SGCAQ16586 387 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 FXNQ16595 210 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 NRN1LQ496H8 165 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 MTX3Q5HYI7 312 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 CYP2R1Q6VVX0 501 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 LRP11Q86VZ4 500 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 DHFR2Q86XF0 187 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 FGFBP3Q8TAT2 258 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 BCAS4Q8TDM0 211 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 HDAC2Q92769 488 aaKnown RBP11.13□□□□□ -0.63
TREX1-203ENST00000456089 C7orf34Q96L11 122 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 LRGUKQ96M69 825 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 ZNF75AQ96N20 296 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 SNX18Q96RF0 628 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 SEPHS2Q99611 448 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 SYT3Q9BQG1 590 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 MRPL37Q9BZE1 423 aaKnown RBP11.13□□□□□ -0.63
TREX1-203ENST00000456089 MUC13Q9H3R2 512 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 C1orf198Q9H425 327 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 ZNF442Q9H7R0 627 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 SIAEQ9HAT2 523 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 ACTR3BQ9P1U1 418 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 MYEF2Q9P2K5 600 aaKnown RBP11.13□□□□□ -0.63
TREX1-203ENST00000456089 LPAR3Q9UBY5 353 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 CMAHPQ9Y471 501 aa11.13□□□□□ -0.63
TREX1-203ENST00000456089 TRBV4-1A0A0J9YWV2 114 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 UNC119BA6NIH7 251 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 CDC42EP2O14613 210 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 OR10H3O60404 316 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 LILRA1O75019 489 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 SERPINA5P05154 406 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 CD14P08571 375 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 ZNF14P17017 642 aaPredicted RBP11.12□□□□□ -0.63
TREX1-203ENST00000456089 RRM2P31350 389 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 CDAP32320 146 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 ALDH3B1P43353 468 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 MAD2L1BPQ15013 274 aaPredicted RBP11.12□□□□□ -0.63
TREX1-203ENST00000456089 TBC1D28Q2M2D7 210 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 CR1LQ2VPA4 569 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 C10orf128Q5T292 105 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 RINLQ6ZS11 566 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 TSEN54Q7Z6J9 526 aaKnown RBP11.12□□□□□ -0.63
TREX1-203ENST00000456089 ZDHHC21Q8IVQ6 265 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 SLC30A7Q8NEW0 376 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 OR1J2Q8NGS2 313 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 POP5Q969H6 163 aaKnown RBP11.12□□□□□ -0.63
TREX1-203ENST00000456089 RSRC1Q96IZ7 334 aaKnown RBP11.12□□□□□ -0.63
TREX1-203ENST00000456089 ZNF570Q96NI8 536 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 TSPAN32Q96QS1 320 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 NARFLQ9H6Q4 476 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 CDH20Q9HBT6 801 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 MYOZ1Q9NP98 299 aaPredicted RBP11.12□□□□□ -0.63
TREX1-203ENST00000456089 IL1RAPQ9NPH3 570 aa11.12□□□□□ -0.63
TREX1-203ENST00000456089 PRPF19Q9UMS4 504 aaKnown RBP11.12□□□□□ -0.63
TREX1-203ENST00000456089 A0A1W2PPL8 197 aa11.11□□□□□ -0.63
TREX1-203ENST00000456089 SLC22A23A1A5C7 686 aa11.11□□□□□ -0.63
TREX1-203ENST00000456089 KRT36O76013 467 aa11.11□□□□□ -0.63
TREX1-203ENST00000456089 NR4A1P22736 598 aa11.11□□□□□ -0.63
TREX1-203ENST00000456089 GIFP27352 417 aa11.11□□□□□ -0.63
TREX1-203ENST00000456089 APEX1P27695 318 aaKnown RBP11.11□□□□□ -0.63
TREX1-203ENST00000456089 APLNRP35414 380 aa11.11□□□□□ -0.63
TREX1-203ENST00000456089 OMPP47874 163 aa11.11□□□□□ -0.63
TREX1-203ENST00000456089 RPS6KA3P51812 740 aa11.11□□□□□ -0.63
TREX1-203ENST00000456089 SELENOVP59797 346 aa11.11□□□□□ -0.63
TREX1-203ENST00000456089 MRPS34P82930 218 aaKnown RBP11.11□□□□□ -0.63
TREX1-203ENST00000456089 FMODQ06828 376 aa11.11□□□□□ -0.63
TREX1-203ENST00000456089 ALKBH6Q3KRA9 238 aa11.11□□□□□ -0.63
TREX1-203ENST00000456089 ALDH16A1Q8IZ83 802 aa11.11□□□□□ -0.63
TREX1-203ENST00000456089 LRRC75AQ8NAA5 344 aa11.11□□□□□ -0.63
TREX1-203ENST00000456089 ZNF519Q8TB69 540 aa11.11□□□□□ -0.63
TREX1-203ENST00000456089 UBASH3BQ8TF42 649 aa11.11□□□□□ -0.63
TREX1-203ENST00000456089 C19orf24Q9BVV8 132 aa11.11□□□□□ -0.63
TREX1-203ENST00000456089 OR51B6Q9H340 312 aa11.11□□□□□ -0.63
TREX1-203ENST00000456089 SLC7A8Q9UHI5 535 aa11.11□□□□□ -0.63
TREX1-203ENST00000456089 ANK2Q01484 3957 aa11.11□□□□□ -0.63
TREX1-203ENST00000456089 AHCYL1O43865 530 aa11.1□□□□□ -0.63
TREX1-203ENST00000456089 HPXP02790 462 aa11.1□□□□□ -0.63
TREX1-203ENST00000456089 SEMG1P04279 462 aa11.1□□□□□ -0.63
TREX1-203ENST00000456089 CCL2P13500 99 aa11.1□□□□□ -0.63
TREX1-203ENST00000456089 ZNF35P13682 527 aa11.1□□□□□ -0.63
TREX1-203ENST00000456089 CCNOP22674 350 aa11.1□□□□□ -0.63
TREX1-203ENST00000456089 SDHAP31040 664 aa11.1□□□□□ -0.63
TREX1-203ENST00000456089 GLRXP35754 106 aa11.1□□□□□ -0.63
TREX1-203ENST00000456089 ZNF133P52736 654 aaPredicted RBP11.1□□□□□ -0.63
TREX1-203ENST00000456089 PCBD1P61457 104 aa11.1□□□□□ -0.63
TREX1-203ENST00000456089 TRIM25Q14258 630 aaKnown RBP11.1□□□□□ -0.63
TREX1-203ENST00000456089 SEC23BQ15437 767 aa11.1□□□□□ -0.63
TREX1-203ENST00000456089 FAM98BQ52LJ0 330 aaKnown RBP11.1□□□□□ -0.63
TREX1-203ENST00000456089 GPR139Q6DWJ6 353 aa11.1□□□□□ -0.63
TREX1-203ENST00000456089 SLC25A47Q6Q0C1 308 aa11.1□□□□□ -0.63
TREX1-203ENST00000456089 SMARCD3Q6STE5 483 aa11.1□□□□□ -0.63
TREX1-203ENST00000456089 DPY19L2P2Q6ZN68 376 aa11.1□□□□□ -0.63
TREX1-203ENST00000456089 TRPM8Q7Z2W7 1104 aa11.1□□□□□ -0.63
TREX1-203ENST00000456089 ZNF584Q8IVC4 421 aa11.1□□□□□ -0.63
TREX1-203ENST00000456089 ZNF786Q8N393 782 aa11.1□□□□□ -0.63
TREX1-203ENST00000456089 CLDN22Q8N7P3 220 aa11.1□□□□□ -0.63
TREX1-203ENST00000456089 FANK1Q8TC84 345 aa11.1□□□□□ -0.63
TREX1-203ENST00000456089 NEU4Q8WWR8 484 aaPredicted RBP11.1□□□□□ -0.63
TREX1-203ENST00000456089 MRPL24Q96A35 216 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms