RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 STOMP27105 288 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 GIFP27352 417 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 OMPP47874 163 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 LIMS1P48059 325 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 GZMKP49863 264 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 UCP2P55851 309 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 SELENOVP59797 346 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 MAD2L1BPQ15013 274 aaPredicted RBP18.22■□□□□ 0.51
HMGB3-205ENST00000455596 FOXL2NBQ6ZUU3 175 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 HIPK1Q86Z02 1210 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 C11orf40Q8WZ69 217 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 DHRS1Q96LJ7 313 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 Q96M85 177 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 NSMCE2Q96MF7 247 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 ZNF570Q96NI8 536 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 ADAM21Q9UKJ8 722 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 SIGLEC7Q9Y286 467 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 RTTNQ86VV8 2226 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 IGHV4-61A0A0C4DH41 118 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 TRBV4-1A0A0J9YWV2 114 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 H7C1C5 153 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 AHCYL1O43865 530 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 PTP4A3O75365 173 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 SEMG1P04279 462 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 CST2P09228 141 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 ZNF16P17020 682 aaPredicted RBP18.21■□□□□ 0.51
HMGB3-205ENST00000455596 CCNOP22674 350 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 LAP3P28838 519 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 MSX2P35548 267 aaPredicted RBP18.21■□□□□ 0.51
HMGB3-205ENST00000455596 SMIM11AP58511 58 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 PCBD1P61457 104 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 LCN6P62502 163 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 PSG4Q00888 419 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 FAM122BQ7Z309 247 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 ALDH16A1Q8IZ83 802 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 DEFB107AQ8IZN7 70 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 OR52J3Q8NH60 311 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 SYNPRQ8TBG9 265 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 MCUR1Q96AQ8 359 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 GPR160Q9UJ42 338 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 MALRD1Q5VYJ5 2156 aa18.21■□□□□ 0.51
HMGB3-205ENST00000455596 ARPC2O15144 300 aa18.2■□□□□ 0.5
HMGB3-205ENST00000455596 GADD45GO95257 159 aa18.2■□□□□ 0.5
HMGB3-205ENST00000455596 ZNF250P15622 560 aa18.2■□□□□ 0.5
HMGB3-205ENST00000455596 ZNF23P17027 643 aa18.2■□□□□ 0.5
HMGB3-205ENST00000455596 MSR1P21757 451 aa18.2■□□□□ 0.5
HMGB3-205ENST00000455596 KLF3P57682 345 aaPredicted RBP18.2■□□□□ 0.5
HMGB3-205ENST00000455596 ERVS71-1P61550 626 aa18.2■□□□□ 0.5
HMGB3-205ENST00000455596 SPIBQ01892 262 aa18.2■□□□□ 0.5
HMGB3-205ENST00000455596 SEC23BQ15437 767 aa18.2■□□□□ 0.5
HMGB3-205ENST00000455596 NKPD1Q17RQ9 610 aa18.2■□□□□ 0.5
HMGB3-205ENST00000455596 MESTQ5EB52 335 aa18.2■□□□□ 0.5
HMGB3-205ENST00000455596 ICA1LQ8NDH6 482 aa18.2■□□□□ 0.5
HMGB3-205ENST00000455596 OR1J1Q8NGS3 322 aa18.2■□□□□ 0.5
HMGB3-205ENST00000455596 AKR7LQ8NHP1 331 aa18.2■□□□□ 0.5
HMGB3-205ENST00000455596 RSRC1Q96IZ7 334 aaKnown RBP18.2■□□□□ 0.5
HMGB3-205ENST00000455596 POM121L2Q96KW2 1035 aa18.2■□□□□ 0.5
HMGB3-205ENST00000455596 OR2H1Q9GZK4 316 aa18.2■□□□□ 0.5
HMGB3-205ENST00000455596 TAAR3PQ9P1P4 343 aa18.2■□□□□ 0.5
HMGB3-205ENST00000455596 EIF3KQ9UBQ5 218 aaKnown RBP18.2■□□□□ 0.5
HMGB3-205ENST00000455596 TIMM10BQ9Y5J6 103 aa18.2■□□□□ 0.5
HMGB3-205ENST00000455596 IGLV3-9A0A075B6K5 115 aa18.19■□□□□ 0.5
HMGB3-205ENST00000455596 KIAA1324LA8MWY0 1029 aaPredicted RBP18.19■□□□□ 0.5
HMGB3-205ENST00000455596 CLPTM1O96005 669 aa18.19■□□□□ 0.5
HMGB3-205ENST00000455596 NAT2P11245 290 aa18.19■□□□□ 0.5
HMGB3-205ENST00000455596 SDHAP31040 664 aa18.19■□□□□ 0.5
HMGB3-205ENST00000455596 GDI2P50395 445 aaKnown RBP18.19■□□□□ 0.5
HMGB3-205ENST00000455596 MNAT1P51948 309 aa18.19■□□□□ 0.5
HMGB3-205ENST00000455596 KRR1Q13601 381 aaKnown RBP18.19■□□□□ 0.5
HMGB3-205ENST00000455596 ALKBH6Q3KRA9 238 aa18.19■□□□□ 0.5
HMGB3-205ENST00000455596 CHRFAM7AQ494W8 412 aa18.19■□□□□ 0.5
HMGB3-205ENST00000455596 SPATS1Q496A3 300 aa18.19■□□□□ 0.5
HMGB3-205ENST00000455596 GPR139Q6DWJ6 353 aa18.19■□□□□ 0.5
HMGB3-205ENST00000455596 UNQ6126/PRO20091Q6UXV3 157 aa18.19■□□□□ 0.5
HMGB3-205ENST00000455596 GPX7Q96SL4 187 aaPredicted RBP18.19■□□□□ 0.5
HMGB3-205ENST00000455596 FUZQ9BT04 418 aa18.19■□□□□ 0.5
HMGB3-205ENST00000455596 NRIP3Q9NQ35 241 aa18.19■□□□□ 0.5
HMGB3-205ENST00000455596 POLE4Q9NR33 117 aa18.19■□□□□ 0.5
HMGB3-205ENST00000455596 TMEM160Q9NX00 188 aa18.19■□□□□ 0.5
HMGB3-205ENST00000455596 SLCO1C1Q9NYB5 712 aa18.19■□□□□ 0.5
HMGB3-205ENST00000455596 LOC100509620A0A075B734 347 aa18.18■□□□□ 0.5
HMGB3-205ENST00000455596 TEX13CA0A0J9YWL9 993 aa18.18■□□□□ 0.5
HMGB3-205ENST00000455596 PRSS37A4D1T9 235 aa18.18■□□□□ 0.5
HMGB3-205ENST00000455596 C5orf49A4QMS7 147 aa18.18■□□□□ 0.5
HMGB3-205ENST00000455596 UNC119BA6NIH7 251 aa18.18■□□□□ 0.5
HMGB3-205ENST00000455596 C12orf71A8MTZ7 269 aa18.18■□□□□ 0.5
HMGB3-205ENST00000455596 LYNX1G3V0Z9 82 aa18.18■□□□□ 0.5
HMGB3-205ENST00000455596 FABP3P05413 133 aa18.18■□□□□ 0.5
HMGB3-205ENST00000455596 LYNX1P0DP58 116 aa18.18■□□□□ 0.5
HMGB3-205ENST00000455596 CHN2P52757 468 aa18.18■□□□□ 0.5
HMGB3-205ENST00000455596 RIN1Q13671 783 aa18.18■□□□□ 0.5
HMGB3-205ENST00000455596 ENDOGQ14249 297 aaKnown RBP18.18■□□□□ 0.5
HMGB3-205ENST00000455596 ELFN2Q5R3F8 820 aa18.18■□□□□ 0.5
HMGB3-205ENST00000455596 SYT9Q86SS6 491 aa18.18■□□□□ 0.5
HMGB3-205ENST00000455596 SNX33Q8WV41 574 aa18.18■□□□□ 0.5
HMGB3-205ENST00000455596 RASD2Q96D21 266 aa18.18■□□□□ 0.5
HMGB3-205ENST00000455596 WACQ9BTA9 647 aa18.18■□□□□ 0.5
HMGB3-205ENST00000455596 ZNF416Q9BWM5 594 aa18.18■□□□□ 0.5
HMGB3-205ENST00000455596 WNT5BQ9H1J7 359 aa18.18■□□□□ 0.5
HMGB3-205ENST00000455596 SONP18583 2426 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms