RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 PIGWQ7Z7B1 504 aa10.32□□□□□ -0.76
USP40-210ENST00000454354 PGAM4Q8N0Y7 254 aa10.32□□□□□ -0.76
USP40-210ENST00000454354 SYNPRQ8TBG9 265 aa10.32□□□□□ -0.76
USP40-210ENST00000454354 HPS1Q92902 700 aa10.32□□□□□ -0.76
USP40-210ENST00000454354 MSI2Q96DH6 328 aaKnown RBP10.32□□□□□ -0.76
USP40-210ENST00000454354 POM121L2Q96KW2 1035 aa10.32□□□□□ -0.76
USP40-210ENST00000454354 FUZQ9BT04 418 aa10.32□□□□□ -0.76
USP40-210ENST00000454354 BCL2L14Q9BZR8 327 aa10.32□□□□□ -0.76
USP40-210ENST00000454354 NDEL1Q9GZM8 345 aa10.32□□□□□ -0.76
USP40-210ENST00000454354 CCNB1IP1Q9NPC3 277 aa10.32□□□□□ -0.76
USP40-210ENST00000454354 ADA2Q9NZK5 511 aa10.32□□□□□ -0.76
USP40-210ENST00000454354 CD300AQ9UGN4 299 aa10.32□□□□□ -0.76
USP40-210ENST00000454354 MAGEL2Q9UJ55 1249 aa10.32□□□□□ -0.76
USP40-210ENST00000454354 FZR1Q9UM11 496 aa10.32□□□□□ -0.76
USP40-210ENST00000454354 ARL2BPQ9Y2Y0 163 aa10.32□□□□□ -0.76
USP40-210ENST00000454354 LOC100509620A0A075B734 347 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 A0A1W2PPW3 197 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 PTP4A3O75365 173 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 CLPTM1O96005 669 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 HPXP02790 462 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 MSR1P21757 451 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 ACHEP22303 614 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 STOMP27105 288 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 LAP3P28838 519 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 RAD52P43351 418 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 OMPP47874 163 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 CHN2P52757 468 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 FXYD6P3P58550 94 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 SELENOVP59797 346 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 ERVS71-1P61550 626 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 GNGT1P63211 74 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 PSG4Q00888 419 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 SGCAQ16586 387 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 FAM166AQ6J272 317 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 SYT9Q86SS6 491 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 RNF148Q8N7C7 305 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 C11orf40Q8WZ69 217 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 C1orf159Q96HA4 380 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 FAM46AQ96IP4 442 aaKnown RBP10.31□□□□□ -0.76
USP40-210ENST00000454354 ZNF570Q96NI8 536 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 WACQ9BTA9 647 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 OR2H1Q9GZK4 316 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 WNT5BQ9H1J7 359 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 CHODLQ9H9P2 273 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 NRIP3Q9NQ35 241 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 POLE4Q9NR33 117 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 SLCO1C1Q9NYB5 712 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 GRHPRQ9UBQ7 328 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 LPAR3Q9UBY5 353 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 TAGLN3Q9UI15 199 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 DUSP13Q9UII6 198 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 GPR160Q9UJ42 338 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 SIGLEC7Q9Y286 467 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 ADAM18Q9Y3Q7 739 aa10.31□□□□□ -0.76
USP40-210ENST00000454354 FAM32AQ9Y421 112 aaKnown RBP10.31□□□□□ -0.76
USP40-210ENST00000454354 TRBV4-1A0A0J9YWV2 114 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 PRSS37A4D1T9 235 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 C17orf100A8MU93 164 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 LYNX1G3V0Z9 82 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 H7C1C5 153 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 XKRYO14609 159 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 LMX1BO60663 402 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 GMNNO75496 209 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 DCTN3O75935 186 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 NCR1O76036 304 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 NDUFB2O95178 105 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 IGHV3-13P01766 116 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 LCKP06239 509 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 FAM157CP0CG43 387 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 LYNX1P0DP58 116 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 NAT2P11245 290 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 ITGA2P17301 1181 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 IGFBP5P24593 272 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 SDHAP31040 664 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 RPL4P36578 427 aaKnown RBP10.3□□□□□ -0.76
USP40-210ENST00000454354 WNT5AP41221 380 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 GYS2P54840 703 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 PCBD1P61457 104 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 LCN6P62502 163 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 ENDOGQ14249 297 aaKnown RBP10.3□□□□□ -0.76
USP40-210ENST00000454354 SEC23BQ15437 767 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 NKPD1Q17RQ9 610 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 FGD3Q5JSP0 725 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 SAMD4BQ5PRF9 694 aaKnown RBP10.3□□□□□ -0.76
USP40-210ENST00000454354 C1orf174Q8IYL3 243 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 ZNF101Q8IZC7 436 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 AKR7LQ8NHP1 331 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 PYURFQ96I23 114 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 RSRC1Q96IZ7 334 aaKnown RBP10.3□□□□□ -0.76
USP40-210ENST00000454354 Q96M85 177 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 LRRC37BQ96QE4 947 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 MDFIQ99750 246 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 SOX7Q9BT81 388 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 ZNF416Q9BWM5 594 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 OR51B6Q9H340 312 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 KRCC1Q9NPI7 259 aaPredicted RBP10.3□□□□□ -0.76
USP40-210ENST00000454354 ARL8BQ9NVJ2 186 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 NKIRAS2Q9NYR9 191 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 TAAR3PQ9P1P4 343 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 KCNS2Q9ULS6 477 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms