RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 GPR6P46095 362 aaPredicted RBP11.04□□□□□ -0.64
CHD3-206ENST00000452447 RAP1BP61224 184 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 ERVS71-1P61550 626 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 RAP1AP62834 184 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 ERVK-25P63136 954 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 CCNIQ14094 377 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 MOGQ16653 247 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 FAM27BQ5VT28 67 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 SLC25A47Q6Q0C1 308 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 HACD2Q6Y1H2 254 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 IL17RELQ6ZVW7 336 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 CPLX4Q7Z7G2 160 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 TREML1Q86YW5 311 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 LINC01356Q8N9X3 169 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 CPEB3Q8NE35 698 aaKnown RBP11.04□□□□□ -0.64
CHD3-206ENST00000452447 OR1J1Q8NGS3 322 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 NABP1Q96AH0 204 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 NMD3Q96D46 503 aaKnown RBP11.04□□□□□ -0.64
CHD3-206ENST00000452447 ELAC2Q9BQ52 826 aaKnown RBP11.04□□□□□ -0.64
CHD3-206ENST00000452447 HINT3Q9NQE9 182 aaKnown RBP11.04□□□□□ -0.64
CHD3-206ENST00000452447 RPS6KA6Q9UK32 745 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 IGLV3-9A0A075B6K5 115 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 A0A087WUU8 490 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 A0A1W2PPL8 197 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 C5orf49A4QMS7 147 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 C17orf100A8MU93 164 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 PHF1O43189 567 aaPredicted RBP11.03□□□□□ -0.64
CHD3-206ENST00000452447 GMNNO75496 209 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 NCK1P16333 377 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 FUT4P22083 530 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 GDI2P50395 445 aaKnown RBP11.03□□□□□ -0.64
CHD3-206ENST00000452447 TMEM33P57088 247 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 PCBD1P61457 104 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 MRPS11P82912 194 aaKnown RBP11.03□□□□□ -0.64
CHD3-206ENST00000452447 CR1LQ2VPA4 569 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 C8orf82Q6P1X6 216 aaPredicted RBP11.03□□□□□ -0.64
CHD3-206ENST00000452447 MBOAT2Q6ZWT7 520 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 CLDN22Q8N7P3 220 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 OR13C2Q8NGS9 318 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 TSPAN32Q96QS1 320 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 NDEL1Q9GZM8 345 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 NMNAT1Q9HAN9 279 aaPredicted RBP11.03□□□□□ -0.64
CHD3-206ENST00000452447 GRHPRQ9UBQ7 328 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 FAM32AQ9Y421 112 aaKnown RBP11.03□□□□□ -0.64
CHD3-206ENST00000452447 XKRYO14609 159 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 TPD52L2O43399 206 aaKnown RBP11.03□□□□□ -0.64
CHD3-206ENST00000452447 PPIHO43447 177 aaKnown RBP11.03□□□□□ -0.64
CHD3-206ENST00000452447 CST2P09228 141 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 LAP3P28838 519 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 GCH1P30793 250 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 THBS2P35442 1172 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 MAGEB1P43366 347 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 GPR4P46093 362 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 CDH15P55291 814 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 PSME3P61289 254 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 CCL8P80075 99 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 PSG4Q00888 419 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 PCGF3Q3KNV8 242 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 TBPL2Q6SJ96 375 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 LRRC75AQ8NAA5 344 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 AKR7LQ8NHP1 331 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 POM121L2Q96KW2 1035 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 ZNF416Q9BWM5 594 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 FAM107BQ9H098 131 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 ANKRD19PQ9H560 264 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 NARFLQ9H6Q4 476 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 SPAG4Q9NPE6 437 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 ZNF275Q9NSD4 429 aaPredicted RBP11.03□□□□□ -0.64
CHD3-206ENST00000452447 ABCD2Q9UBJ2 740 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 TMEM5Q9Y2B1 443 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 TIMM10BQ9Y5J6 103 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 ENPP4Q9Y6X5 453 aa11.03□□□□□ -0.64
CHD3-206ENST00000452447 CDC42EP2O14613 210 aa11.02□□□□□ -0.65
CHD3-206ENST00000452447 NCR1O76036 304 aa11.02□□□□□ -0.65
CHD3-206ENST00000452447 PRSS23O95084 383 aa11.02□□□□□ -0.65
CHD3-206ENST00000452447 MSR1P21757 451 aa11.02□□□□□ -0.65
CHD3-206ENST00000452447 PCMT1P22061 227 aa11.02□□□□□ -0.65
CHD3-206ENST00000452447 GYS2P54840 703 aa11.02□□□□□ -0.65
CHD3-206ENST00000452447 ZNF718Q3SXZ3 478 aa11.02□□□□□ -0.65
CHD3-206ENST00000452447 ZBED5Q49AG3 693 aa11.02□□□□□ -0.65
CHD3-206ENST00000452447 GLYATQ6IB77 296 aa11.02□□□□□ -0.65
CHD3-206ENST00000452447 TMPRSS11FQ6ZWK6 438 aa11.02□□□□□ -0.65
CHD3-206ENST00000452447 C1orf174Q8IYL3 243 aa11.02□□□□□ -0.65
CHD3-206ENST00000452447 ZNF101Q8IZC7 436 aa11.02□□□□□ -0.65
CHD3-206ENST00000452447 YIPF5Q969M3 257 aa11.02□□□□□ -0.65
CHD3-206ENST00000452447 OR2H1Q9GZK4 316 aa11.02□□□□□ -0.65
CHD3-206ENST00000452447 DECR2Q9NUI1 292 aa11.02□□□□□ -0.65
CHD3-206ENST00000452447 ADA2Q9NZK5 511 aa11.02□□□□□ -0.65
CHD3-206ENST00000452447 EGFL7Q9UHF1 273 aa11.02□□□□□ -0.65
CHD3-206ENST00000452447 TMEFF2Q9UIK5 374 aaPredicted RBP11.02□□□□□ -0.65
CHD3-206ENST00000452447 ADAM18Q9Y3Q7 739 aa11.02□□□□□ -0.65
CHD3-206ENST00000452447 LOC100509620A0A075B734 347 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 PLSCR5A0PG75 271 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 C12orf71A8MTZ7 269 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 B4DSR2 109 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 H7C1C5 153 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 CDC14BO60729 498 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 IGHV3-13P01766 116 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 H1F0P07305 194 aaKnown RBP11.01□□□□□ -0.65
CHD3-206ENST00000452447 CD14P08571 375 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms