RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 ZFP1Q6P2D0 407 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 TMEM53Q6P2H8 277 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 DNM1P34Q6PK57 102 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 JAZF1Q86VZ6 243 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 HS3ST5Q8IZT8 346 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 NUP37Q8NFH4 326 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 OR2T33Q8NG76 320 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 OR4F15Q8NGB8 312 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 OR4K13Q8NH42 304 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 OR5K1Q8NHB7 308 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 SMAP2Q8WU79 429 aaPredicted RBP12.45□□□□□ -0.42
COL3A1-203ENST00000450867 NMNAT3Q96T66 252 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 DHRS9Q9BPW9 319 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 BDH2Q9BUT1 245 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 TSSK6Q9BXA6 273 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 GABARAPL1Q9H0R8 117 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 FAIMQ9NVQ4 179 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 FKBP7Q9Y680 259 aa12.45□□□□□ -0.42
COL3A1-203ENST00000450867 OR6C68A6NDL8 312 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 SLC16A7O60669 478 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 SOX14O95416 240 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 SNAP29O95721 258 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 RENP00797 406 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 SCG5P05408 212 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 IGFBP1P08833 259 aaPredicted RBP12.44□□□□□ -0.42
COL3A1-203ENST00000450867 PATE4P0C8F1 98 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 GAAP10253 952 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 OSMP13725 252 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 NOS3P29474 1203 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 GUCA1AP43080 201 aaPredicted RBP12.44□□□□□ -0.42
COL3A1-203ENST00000450867 PCBD1P61457 104 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 LSM6P62312 80 aaKnown RBP12.44□□□□□ -0.42
COL3A1-203ENST00000450867 HGFACQ04756 655 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 PIGFQ07326 219 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.44□□□□□ -0.42
COL3A1-203ENST00000450867 NPRL3Q12980 569 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 KPNB1Q14974 876 aaKnown RBP12.44□□□□□ -0.42
COL3A1-203ENST00000450867 SGCAQ16586 387 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 SLC36A3Q495N2 470 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 CLEC12AQ5QGZ9 265 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 C11orf71Q6IPW1 123 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 LEG1Q6P5S2 330 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 HIPK1Q86Z02 1210 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 GLB1L2Q8IW92 636 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 C10orf67Q8IYJ2 551 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 LRRC75A-AS1Q8N1F1 130 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 PARP8Q8N3A8 854 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 OR4Q3Q8NH05 313 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 FBXO17Q96EF6 278 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 CENPNQ96H22 339 aaPredicted RBP12.44□□□□□ -0.42
COL3A1-203ENST00000450867 MS4A3Q96HJ5 214 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 RAB3IPQ96QF0 476 aaPredicted RBP12.44□□□□□ -0.42
COL3A1-203ENST00000450867 CCL19Q99731 98 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 KCNS3Q9BQ31 491 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 TRAF4Q9BUZ4 470 aaPredicted RBP12.44□□□□□ -0.42
COL3A1-203ENST00000450867 ZNF416Q9BWM5 594 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 NMNAT2Q9BZQ4 307 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 ZNF442Q9H7R0 627 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 ZNF701Q9NV72 531 aaPredicted RBP12.44□□□□□ -0.42
COL3A1-203ENST00000450867 KLHL21Q9UJP4 597 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 B9D1Q9UPM9 204 aa12.44□□□□□ -0.42
COL3A1-203ENST00000450867 F8P00451 2351 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 A0A1W2PPL8 197 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 C12orf71A8MTZ7 269 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 H3BNX3 289 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 ICMTO60725 284 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 PTHP01270 115 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 CD8AP01732 235 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 SOD3P08294 240 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 ZNF32P17041 273 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 PRKACGP22612 351 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 TTKP33981 857 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 GRK5P34947 590 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 GABPB1Q06547 395 aaPredicted RBP12.43□□□□□ -0.42
COL3A1-203ENST00000450867 RAB39AQ14964 217 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 SPNS3Q6ZMD2 512 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 OR6V1Q8N148 313 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 SVOPLQ8N434 492 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 LRRC18Q8N456 261 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 SDR9C7Q8NEX9 313 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 SLC26A10Q8NG04 563 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 OR52E2Q8NGJ4 325 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 TEX47Q8TBZ9 253 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 LRTOMTQ8WZ04 291 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 TSSK2Q96PF2 358 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 RBM4Q9BWF3 364 aaKnown RBP12.43□□□□□ -0.42
COL3A1-203ENST00000450867 GSX2Q9BZM3 304 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 KCNN2Q9H2S1 579 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 ZNF556Q9HAH1 456 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 CMC2Q9NRP2 79 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 POU2F3Q9UKI9 436 aa12.43□□□□□ -0.42
COL3A1-203ENST00000450867 COA3Q9Y2R0 106 aaPredicted RBP12.43□□□□□ -0.42
COL3A1-203ENST00000450867 ZNF469Q96JG9 3925 aaPredicted RBP12.42□□□□□ -0.42
COL3A1-203ENST00000450867 NR4A1P22736 598 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 APOBEC3AP31941 199 aaPredicted RBP12.42□□□□□ -0.42
COL3A1-203ENST00000450867 DAPP51397 102 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 HIST1H3AP68431 136 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 CDK5Q00535 292 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 PSG4Q00888 419 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 AQP6Q13520 282 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms