RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 RSRC1Q96IZ7 334 aaKnown RBP12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 FOXN4Q96NZ1 517 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 VRK1Q99986 396 aaPredicted RBP12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 WNT5BQ9H1J7 359 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 C1orf21Q9H246 121 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 C1orf198Q9H425 327 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 VSX1Q9NZR4 365 aaPredicted RBP12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 MYEF2Q9P2K5 600 aaKnown RBP12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 GRHPRQ9UBQ7 328 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 IL20RAQ9UHF4 553 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 YLPM1P49750 1951 aaKnown RBP12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 IGLV3-9A0A075B6K5 115 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 ACOT8O14734 319 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 ARPC3O15145 178 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 SYNGR3O43761 229 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 PTHP01270 115 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 ADRA2AP08913 450 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 ZNF250P15622 560 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 SLC25A16P16260 332 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 CTLA4P16410 223 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 FPR3P25089 353 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 SDHAP31040 664 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 CDKN2AP42771 156 aaKnown RBP12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 UCP2P55851 309 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 MXRA7P84157 204 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 RFX4Q33E94 735 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 ZNF770Q6IQ21 691 aaPredicted RBP12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 PTCHD4Q6ZW05 846 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 SYT9Q86SS6 491 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 OR4C15Q8NGM1 316 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 RASD2Q96D21 266 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 ZNF416Q9BWM5 594 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 OR2H1Q9GZK4 316 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 POLE4Q9NR33 117 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 SLC7A8Q9UHI5 535 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 TIMM10BQ9Y5J6 103 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 IER3IP1Q9Y5U9 82 aa12.08□□□□□ -0.48
RTFDC1-204ENST00000449062 TEX13CA0A0J9YWL9 993 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 IQCMA0A1B0GVH7 501 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 ICMTO60725 284 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 KRT36O76013 467 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 CSF3P09919 207 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 STOMP27105 288 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 GIFP27352 417 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 RRM2P31350 389 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 WNT5AP41221 380 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 GALK2Q01415 458 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 SPIBQ01892 262 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 PLP2Q04941 152 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 MTX3Q5HYI7 312 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.07□□□□□ -0.482e-6■■■■■ 31.6
RTFDC1-204ENST00000449062 PGM2L1Q6PCE3 622 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 SMARCD3Q6STE5 483 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 OR1J2Q8NGS2 313 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 AKR7LQ8NHP1 331 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 NEU4Q8WWR8 484 aaPredicted RBP12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 MCUR1Q96AQ8 359 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 ZNF570Q96NI8 536 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 DDOQ99489 341 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 TRIM15Q9C019 465 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 RAB1BQ9H0U4 201 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 MUC13Q9H3R2 512 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 REV1Q9UBZ9 1251 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 AURKCQ9UQB9 309 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 LYVE1Q9Y5Y7 322 aa12.07□□□□□ -0.48
RTFDC1-204ENST00000449062 LOC390937A0A1W2PQ73 354 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 NDUFS8O00217 210 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 DCTN6O00399 190 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 CD5LO43866 347 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 STAMBPO95630 424 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 CLPTM1O96005 669 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 FAM157BP0CG42 384 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 MSR1P21757 451 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 RAD52P43351 418 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 NR4A2P43354 598 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 PDLIM4P50479 330 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 ERVS71-1P61550 626 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 RPS23P62266 143 aaKnown RBP12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 TSPAN31Q12999 210 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 KRR1Q13601 381 aaKnown RBP12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 KCNMB1Q16558 191 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 TMEM249Q2WGJ8 235 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 ZNF774Q6NX45 483 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 PGBD2Q6P3X8 592 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 DHFR2Q86XF0 187 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 ZNF101Q8IZC7 436 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 ZNF786Q8N393 782 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 CLPTM1LQ96KA5 538 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 SYT3Q9BQG1 590 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 WACQ9BTA9 647 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 NUAK2Q9H093 628 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 SYT4Q9H2B2 425 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 KCNN2Q9H2S1 579 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 OR52D1Q9H346 318 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 MS4A5Q9H3V2 200 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 MAGIXQ9H6Y5 334 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 CDH20Q9HBT6 801 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 MYOZ1Q9NP98 299 aaPredicted RBP12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 EMC7Q9NPA0 242 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 CCNB1IP1Q9NPC3 277 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms