RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 PRELID3BQ9Y3B1 194 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 KIR2DS1A0A191URI9 304 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 LGALS8O00214 317 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 EIF4E2O60573 245 aaKnown RBP7.13□□□□□ -1.27
NEDD9-204ENST00000448183 OR2C1O95371 312 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 IGFBP1P08833 259 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-204ENST00000448183 ALOX5APP20292 161 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 TGFBR1P36897 503 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 KIR2DS4P43632 304 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 TLE1Q04724 770 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 TPBGQ13641 420 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 KIR2DS1Q14954 304 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 ANKRD34AQ69YU3 496 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 H1FNTQ75WM6 255 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-204ENST00000448183 RABEPKQ7Z6M1 372 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 RHBDD1Q8TEB9 315 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 HPSE2Q8WWQ2 592 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 RLN3Q8WXF3 142 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 HDAC8Q9BY41 377 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 GAREM1Q9H706 876 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 LYRM4Q9HD34 91 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 DNMT3BQ9UBC3 853 aaKnown RBP7.13□□□□□ -1.27
NEDD9-204ENST00000448183 COA3Q9Y2R0 106 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-204ENST00000448183 HCFC2Q9Y5Z7 792 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 MICAL3Q7RTP6 2002 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 SNRPGP15A8MWD9 76 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 GFYI3L273 518 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 SCRG1O75711 98 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 GLSO94925 669 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-204ENST00000448183 S100A8P05109 93 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 CST5P28325 142 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-204ENST00000448183 AQP6Q13520 282 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 TAF9Q16594 264 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 CDKN3Q16667 212 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF813Q6ZN06 617 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.13□□□□□ -1.27
NEDD9-204ENST00000448183 GRINAQ7Z429 371 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 FAM58AQ8N1B3 248 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 OR2L13Q8N349 312 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 OR1J2Q8NGS2 313 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 C2CD4CQ8TF44 421 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 LYSMD1Q96S90 227 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 SDF2Q99470 211 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 CXCL16Q9H2A7 254 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 SPACA1Q9HBV2 294 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 LTB4R2Q9NPC1 389 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 NXT1Q9UKK6 140 aaKnown RBP7.13□□□□□ -1.27
NEDD9-204ENST00000448183 C19orf53Q9UNZ5 99 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-204ENST00000448183 OSGIN2Q9Y236 505 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 NOSIPQ9Y314 301 aaKnown RBP7.13□□□□□ -1.27
NEDD9-204ENST00000448183 MN1Q10571 1320 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-204ENST00000448183 A0A1B0GUH1 482 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 LOC107986453A0A1B0GWG9 222 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 OR5H14A6NHG9 310 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 TUBAL3A6NHL2 446 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 GPR171O14626 319 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 NXPH2O95156 264 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 DUSP1P28562 367 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 CHRNB4P30926 498 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 RAD52P43351 418 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 SLC6A12P48065 614 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 DIO1P49895 249 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 FABP5Q01469 135 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 SLC10A1Q14973 349 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 PHYHD1Q5SRE7 291 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 FAHD1Q6P587 224 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 DOK3Q7L591 496 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 GRAMD2AQ8IUY3 354 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 RBMXL3Q8N7X1 1067 aaKnown RBP7.13□□□□□ -1.27
NEDD9-204ENST00000448183 OR5M8Q8NGP6 311 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 PARP12Q9H0J9 701 aaKnown RBP7.13□□□□□ -1.27
NEDD9-204ENST00000448183 SLC6A17Q9H1V8 727 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 SEMA6CQ9H3T2 930 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 BANF2Q9H503 90 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 PCDHB10Q9UN67 800 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 NTNG1Q9Y2I2 539 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 ARRDC5A6NEK1 342 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF814B7Z6K7 855 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 UMAD1C9J7I0 102 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 TMX2-CTNND1H3BSU7 103 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 CT45A6P0DMU7 189 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 CT45A5P0DMU8 189 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 CT45A7P0DMV0 189 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 CT45A8P0DMV1 189 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 CT45A9P0DMV2 189 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 ADRA2CP18825 462 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 SSR4P51571 173 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.13□□□□□ -1.27
NEDD9-204ENST00000448183 TMEM52BQ4KMG9 183 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 CT45A2Q5DJT8 189 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 CT45A1Q5HYN5 189 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 TCTN3Q6NUS6 607 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 CAMKMTQ7Z624 323 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 CT45A3Q8NHU0 189 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 GNPNAT1Q96EK6 184 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-204ENST00000448183 KCNJ15Q99712 375 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 IKZF5Q9H5V7 419 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 SLC25A19Q9HC21 320 aa7.13□□□□□ -1.27
NEDD9-204ENST00000448183 IFITM5A6NNB3 132 aa7.12□□□□□ -1.27
NEDD9-204ENST00000448183 RGS11O94810 467 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms