RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 PABPC1L2AQ5JQF8 200 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 CLEC12AQ5QGZ9 265 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 FAM27BQ5VT28 67 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 UGT2A3Q6UWM9 527 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 PRSS57Q6UWY2 283 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 TMEM179BQ7Z7N9 219 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 CIARTQ8N365 385 aaPredicted RBP12.81□□□□□ -0.36
HDAC4-204ENST00000446876 SLC30A7Q8NEW0 376 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 IL17RDQ8NFM7 739 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 OR8D4Q8NGM9 314 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 AKR7LQ8NHP1 331 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 TSSK2Q96PF2 358 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 PLA2G12AQ9BZM1 189 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 OR51B6Q9H340 312 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 CCNB1IP1Q9NPC3 277 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 POLE4Q9NR33 117 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 VSX1Q9NZR4 365 aaPredicted RBP12.81□□□□□ -0.36
HDAC4-204ENST00000446876 CDH10Q9Y6N8 788 aa12.81□□□□□ -0.36
HDAC4-204ENST00000446876 TCRBV3S1A0A5B6 114 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 H7C1Q1 480 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 DCTN6O00399 190 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 MPZL1O95297 269 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 SOX14O95416 240 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 GPANK1O95872 356 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 FAM157BP0CG42 384 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 HIST1H1CP16403 213 aaKnown RBP12.8□□□□□ -0.36
HDAC4-204ENST00000446876 MSR1P21757 451 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 MICAQ29983 383 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 SLC35F1Q5T1Q4 408 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 LEG1Q6P5S2 330 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 DPPA2Q7Z7J5 298 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 ADCK1Q86TW2 530 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 SVOPLQ8N434 492 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 CPEB3Q8NE35 698 aaKnown RBP12.8□□□□□ -0.36
HDAC4-204ENST00000446876 OR10G2Q8NGC3 310 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 OR4K13Q8NH42 304 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 SLCO4A1Q96BD0 722 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 NMNAT3Q96T66 252 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 ZNF416Q9BWM5 594 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 NUAK2Q9H093 628 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 KCNN2Q9H2S1 579 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 FN3KQ9H479 309 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 ZNF442Q9H7R0 627 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 CDH20Q9HBT6 801 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 FBXL3Q9UKT7 428 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 FZR1Q9UM11 496 aa12.8□□□□□ -0.36
HDAC4-204ENST00000446876 COA3Q9Y2R0 106 aaPredicted RBP12.8□□□□□ -0.36
HDAC4-204ENST00000446876 IQCMA0A1B0GVH7 501 aa12.79□□□□□ -0.36
HDAC4-204ENST00000446876 SMAD7O15105 426 aaKnown RBP12.79□□□□□ -0.36
HDAC4-204ENST00000446876 SSX4O60224 188 aa12.79□□□□□ -0.36
HDAC4-204ENST00000446876 FKBP6O75344 327 aa12.79□□□□□ -0.36
HDAC4-204ENST00000446876 KHDRBS3O75525 346 aaKnown RBP12.79□□□□□ -0.36
HDAC4-204ENST00000446876 LY6HO94772 140 aa12.79□□□□□ -0.36
HDAC4-204ENST00000446876 CST2P09228 141 aa12.79□□□□□ -0.36
HDAC4-204ENST00000446876 APEHP13798 732 aaKnown RBP12.79□□□□□ -0.36
HDAC4-204ENST00000446876 SNRPD2P62316 118 aaKnown RBP12.79□□□□□ -0.36
HDAC4-204ENST00000446876 PSG4Q00888 419 aa12.79□□□□□ -0.36
HDAC4-204ENST00000446876 GALK2Q01415 458 aa12.79□□□□□ -0.36
HDAC4-204ENST00000446876 PLP2Q04941 152 aa12.79□□□□□ -0.36
HDAC4-204ENST00000446876 CLEC12BQ2HXU8 276 aa12.79□□□□□ -0.36
HDAC4-204ENST00000446876 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.79□□□□□ -0.36
HDAC4-204ENST00000446876 JAZF1Q86VZ6 243 aa12.79□□□□□ -0.36
HDAC4-204ENST00000446876 HS3ST5Q8IZT8 346 aa12.79□□□□□ -0.36
HDAC4-204ENST00000446876 LINC00471Q8N535 108 aa12.79□□□□□ -0.36
HDAC4-204ENST00000446876 SDR9C7Q8NEX9 313 aa12.79□□□□□ -0.36
HDAC4-204ENST00000446876 POP5Q969H6 163 aaKnown RBP12.79□□□□□ -0.36
HDAC4-204ENST00000446876 SMR3AQ99954 134 aa12.79□□□□□ -0.36
HDAC4-204ENST00000446876 NIPSNAP1Q9BPW8 284 aa12.79□□□□□ -0.36
HDAC4-204ENST00000446876 OR2H1Q9GZK4 316 aa12.79□□□□□ -0.36
HDAC4-204ENST00000446876 WNT5BQ9H1J7 359 aa12.79□□□□□ -0.36
HDAC4-204ENST00000446876 GSX1Q9H4S2 264 aaPredicted RBP12.79□□□□□ -0.36
HDAC4-204ENST00000446876 TBC1D23Q9NUY8 699 aa12.79□□□□□ -0.36
HDAC4-204ENST00000446876 CHD3Q12873 2000 aaKnown RBP12.79□□□□□ -0.36
HDAC4-204ENST00000446876 CR1P17927 2039 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 TMEM129A0AVI4 362 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 B9A039 149 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 H7C417 338 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 GNGT2O14610 69 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 ARPC3O15145 178 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 AHCYL1O43865 530 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 TP53P04637 393 aaPredicted RBP12.78□□□□□ -0.36
HDAC4-204ENST00000446876 CCNOP22674 350 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 NOS3P29474 1203 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 APLNRP35414 380 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 GUCA1AP43080 201 aaPredicted RBP12.78□□□□□ -0.36
HDAC4-204ENST00000446876 CENPAP49450 140 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 NUDT6P53370 316 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 ERVS71-1P61550 626 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 CBX1P83916 185 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 TNK1Q13470 666 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 RAB35Q15286 201 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 EFNB3Q15768 340 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 MEP1BQ16820 701 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 TBC1D28Q2M2D7 210 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 ZNF774Q6NX45 483 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 RASSF6Q6ZTQ3 369 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 LRP11Q86VZ4 500 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 OR52L1Q8NGH7 329 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 OR52E2Q8NGJ4 325 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 GIPC3Q8TF64 312 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms