RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 CSN1S1P47710 185 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 DUSP5Q16690 384 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 LINC00299Q6ZSB3 139 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 C12orf45Q8N5I9 185 aaPredicted RBP7.82□□□□□ -1.16
PTPN3-204ENST00000446349 OR2AE1Q8NHA4 323 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 CA5BP1Q8WTZ4 195 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 EGLN2Q96KS0 407 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 CNTNAP3BQ96NU0 1288 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 TMEM246Q9BRR3 403 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 ZNF649Q9BS31 505 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 R3HDMLQ9H3Y0 253 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 ZCCHC4Q9H5U6 513 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 KCNE1BA0A087WTH5 132 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 RNF4P78317 190 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 RELAQ04206 551 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 ZNF74Q16587 644 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 C9orf50Q5SZB4 431 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 GABRG3Q99928 467 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 IL21Q9HBE4 155 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 DLL4Q9NR61 685 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 UNC13CQ8NB66 2214 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 SMIM30A4D0T7 59 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 ERHP84090 104 aaKnown RBP7.81□□□□□ -1.16
PTPN3-204ENST00000446349 P2RY14Q15391 338 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 LYPD8Q6UX82 237 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 FBXW12Q6X9E4 464 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 MYOZ1Q9NP98 299 aaPredicted RBP7.81□□□□□ -1.16
PTPN3-204ENST00000446349 SHANK3Q9BYB0 1731 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 TRBV4-1A0A0J9YWV2 114 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 ALPLP05186 524 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 ALDOCP09972 364 aaKnown RBP7.81□□□□□ -1.16
PTPN3-204ENST00000446349 PIPP12273 146 aaPredicted RBP7.81□□□□□ -1.16
PTPN3-204ENST00000446349 HNF1AP20823 631 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 LAP3P28838 519 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 TMEM108Q6UXF1 575 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 VRK3Q8IV63 474 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 SCCPDHQ8NBX0 429 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 M1APQ8TC57 530 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 ASB5Q8WWX0 329 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 TMEM106AQ96A25 262 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 AKR1E2Q96JD6 320 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 DEFB127Q9H1M4 99 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 MAP1BP46821 2468 aaKnown RBP7.81□□□□□ -1.16
PTPN3-204ENST00000446349 TUSC2O75896 110 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 AKR1C1Q04828 323 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 ATPAF1Q5TC12 328 aaPredicted RBP7.81□□□□□ -1.16
PTPN3-204ENST00000446349 C9orf135Q5VTT2 229 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 OVCH1Q7RTY7 1134 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 DCXRQ7Z4W1 244 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 ADGRG3Q86Y34 549 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 SPARTQ8N0X7 666 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 WFDC5Q8TCV5 224 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 APOBEC3DQ96AK3 386 aaPredicted RBP7.81□□□□□ -1.16
PTPN3-204ENST00000446349 SLC35E1Q96K37 410 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 C3orf30Q96M34 536 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 OR11A1Q9GZK7 315 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 SLA2Q9H6Q3 261 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 AMMECR1Q9Y4X0 333 aaPredicted RBP7.81□□□□□ -1.16
PTPN3-204ENST00000446349 K7EQS6 105 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 KLK8O60259 260 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 CA5AP35218 305 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 YRDCQ86U90 279 aaKnown RBP7.81□□□□□ -1.16
PTPN3-204ENST00000446349 OR51A4Q8NGJ6 313 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 DUSP15Q9H1R2 295 aaPredicted RBP7.81□□□□□ -1.16
PTPN3-204ENST00000446349 SLC6A17Q9H1V8 727 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 LIN7CQ9NUP9 197 aaKnown RBP7.81□□□□□ -1.16
PTPN3-204ENST00000446349 HIF1ANQ9NWT6 349 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 TMEM82A0PJX8 343 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 ZNF705EA8MWA4 302 aaPredicted RBP7.81□□□□□ -1.16
PTPN3-204ENST00000446349 TERTO14746 1132 aaKnown RBP7.81□□□□□ -1.16
PTPN3-204ENST00000446349 SSX5O60225 188 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 GASTP01350 101 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 HLA-AP01891 365 aaKnown RBP7.81□□□□□ -1.16
PTPN3-204ENST00000446349 AADACP22760 399 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 LUMP51884 338 aaPredicted RBP7.81□□□□□ -1.16
PTPN3-204ENST00000446349 XKR7Q5GH72 579 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 CDC20BQ86Y33 519 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 CMTM3Q96MX0 182 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 MKRN2Q9H000 416 aaKnown RBP7.81□□□□□ -1.16
PTPN3-204ENST00000446349 CHST8Q9H2A9 424 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 OR51J1Q9H342 316 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 LANCL2Q9NS86 450 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 RNF150Q9ULK6 438 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 TRDV1A0A1B0GX56 115 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 QDPRP09417 244 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 TFPTP0C1Z6 253 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 TNK1Q13470 666 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 ZNF679Q8IYX0 411 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 LGI3Q8N145 548 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 KDM8Q8N371 416 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 CIB3Q96Q77 187 aaPredicted RBP7.81□□□□□ -1.16
PTPN3-204ENST00000446349 RAB19A4D1S5 217 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 BET1O15155 118 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 HPP00738 406 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 SSBP1Q04837 148 aaKnown RBP7.81□□□□□ -1.16
PTPN3-204ENST00000446349 FAPQ12884 760 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 MEP1BQ16820 701 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 AARDQ4LEZ3 155 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 LKAAEAR1Q8TD35 194 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 ASB13Q8WXK3 278 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms