RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 MGRN1O60291 552 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 BAG2O95816 211 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 CD3EP07766 207 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 GAAP10253 952 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 CLUP10909 449 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 ZNF14P17017 642 aaPredicted RBP13.93□□□□□ -0.18
USP39-205ENST00000442708 NPR2P20594 1047 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 IGFBP5P24593 272 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 PYCR1P32322 319 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 PTDSS1P48651 473 aaKnown RBP13.93□□□□□ -0.18
USP39-205ENST00000442708 IDH3GP51553 393 aaPredicted RBP13.93□□□□□ -0.18
USP39-205ENST00000442708 RAB1AP62820 205 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 ELF3P78545 371 aaPredicted RBP13.93□□□□□ -0.18
USP39-205ENST00000442708 NPRL3Q12980 569 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 GSG1Q2KHT4 349 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 ADAM5Q6NVV9 412 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 TMEM108Q6UXF1 575 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 ZNF704Q6ZNC4 412 aaPredicted RBP13.93□□□□□ -0.18
USP39-205ENST00000442708 SLC16A14Q7RTX9 510 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 ZNF584Q8IVC4 421 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 FAM169BQ8N8A8 192 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 OR9Q1Q8NGQ5 310 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 STMN2Q93045 179 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 LURAP1Q96LR2 239 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 SLC29A1Q99808 456 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 ZNF416Q9BWM5 594 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 MED20Q9H944 212 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 RNF115Q9Y4L5 304 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 FAM183AA6NL82 134 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 SURF4O15260 269 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 UBL3O95164 117 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 FARS2O95363 451 aaKnown RBP13.92□□□□□ -0.18
USP39-205ENST00000442708 ALPLP05186 524 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 MSR1P21757 451 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 PTAFRP25105 342 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 CRABP1P29762 137 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 CALCRP30988 508 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 ESRRGP62508 458 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 DAG1Q14118 895 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 RAB39AQ14964 217 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 PTGES3Q15185 160 aaKnown RBP13.92□□□□□ -0.18
USP39-205ENST00000442708 RCN1Q15293 331 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 MEP1BQ16820 701 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 C3orf36Q3SXR2 165 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 LYPD4Q6UWN0 246 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 GLB1L2Q8IW92 636 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 CBR4Q8N4T8 237 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 C11orf40Q8WZ69 217 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 PTP4A1Q93096 173 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 RACGAP1Q9H0H5 632 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 KLHL21Q9UJP4 597 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 FKBP7Q9Y680 259 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 SPG11Q96JI7 2443 aa13.92□□□□□ -0.18
USP39-205ENST00000442708 TEP1Q99973 2627 aaKnown RBP13.91□□□□□ -0.18
USP39-205ENST00000442708 RIIAD1A6NNX1 92 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 ZAR1LA6NP61 321 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 ATP6V1G2-DDX39BF2Z307 99 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 M0R129 80 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 TFP02787 698 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 GYPBP06028 91 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 CST2P09228 141 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 ANPEPP15144 967 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 ZNF32P17041 273 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 ARR3P36575 388 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 CENPAP49450 140 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 NAAAQ02083 359 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 KCNMB1Q16558 191 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 B3GLCTQ6Y288 498 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 PIAS4Q8N2W9 510 aaPredicted RBP13.91□□□□□ -0.18
USP39-205ENST00000442708 CPEB3Q8NE35 698 aaKnown RBP13.91□□□□□ -0.18
USP39-205ENST00000442708 SLC26A10Q8NG04 563 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 OR51L1Q8NGJ5 315 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 NANOS1Q8WY41 292 aaKnown RBP13.91□□□□□ -0.18
USP39-205ENST00000442708 RBM4BQ9BQ04 359 aaKnown RBP13.91□□□□□ -0.18
USP39-205ENST00000442708 WNT5BQ9H1J7 359 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 USE1Q9NZ43 259 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 MOKQ9UQ07 419 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 RTTNQ86VV8 2226 aa13.91□□□□□ -0.18
USP39-205ENST00000442708 ANKRD17O75179 2603 aaKnown RBP13.91□□□□□ -0.18
USP39-205ENST00000442708 PLCE1Q9P212 2302 aa13.9□□□□□ -0.18
USP39-205ENST00000442708 PSKH1P11801 424 aa13.9□□□□□ -0.18
USP39-205ENST00000442708 SPI1P17947 270 aa13.9□□□□□ -0.18
USP39-205ENST00000442708 SLC25A1P53007 311 aa13.9□□□□□ -0.18
USP39-205ENST00000442708 PSG4Q00888 419 aa13.9□□□□□ -0.18
USP39-205ENST00000442708 SLC36A2Q495M3 483 aa13.9□□□□□ -0.18
USP39-205ENST00000442708 ZNF672Q499Z4 452 aaPredicted RBP13.9□□□□□ -0.18
USP39-205ENST00000442708 PABPC1L2AQ5JQF8 200 aa13.9□□□□□ -0.18
USP39-205ENST00000442708 SLX4IPQ5VYV7 408 aa13.9□□□□□ -0.18
USP39-205ENST00000442708 C12orf73Q69YU5 71 aa13.9□□□□□ -0.18
USP39-205ENST00000442708 DNM1P34Q6PK57 102 aa13.9□□□□□ -0.18
USP39-205ENST00000442708 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.9□□□□□ -0.18
USP39-205ENST00000442708 AKR7LQ8NHP1 331 aa13.9□□□□□ -0.18
USP39-205ENST00000442708 AKAP1Q92667 903 aaKnown RBP eCLIP13.9□□□□□ -0.18
USP39-205ENST00000442708 GABARAPL3Q9BY60 117 aa13.9□□□□□ -0.18
USP39-205ENST00000442708 RNF121Q9H920 327 aa13.9□□□□□ -0.18
USP39-205ENST00000442708 HINT3Q9NQE9 182 aaKnown RBP13.9□□□□□ -0.18
USP39-205ENST00000442708 MRPL22Q9NWU5 206 aaKnown RBP13.9□□□□□ -0.18
USP39-205ENST00000442708 IGHV2OR16-5A0A0B4J2B6 119 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 TVP23AA6NH52 213 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 E7EQL1 145 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms