RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 CASP12Q6UXS9 341 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 MOB3CQ70IA8 216 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 H2BFWTQ7Z2G1 175 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 ZC3HC1Q86WB0 502 aaKnown RBP9.45□□□□□ -0.9
SYNE2-206ENST00000441438 SYT12Q8IV01 421 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 MRPL41Q8IXM3 137 aaKnown RBP9.45□□□□□ -0.9
SYNE2-206ENST00000441438 INO80EQ8NBZ0 244 aaPredicted RBP9.45□□□□□ -0.9
SYNE2-206ENST00000441438 KCNJ9Q92806 393 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 ZNF778Q96MU6 729 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 KLHL32Q96NJ5 620 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 SDCBP2Q9H190 292 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 PSMB11A5LHX3 300 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 PRORSD1PA6NEY8 169 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 M0QZQ0 153 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 C6orf47O95873 294 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 IFNW1P05000 195 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 IL1RNP18510 177 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 TNFSF9P41273 254 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 HSF1Q00613 529 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 RGS1Q08116 209 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 CNTN1Q12860 1018 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 NFATC3Q12968 1075 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 SEMA3BQ13214 749 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 ZNF750Q32MQ0 723 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 PLPPR5Q32ZL2 321 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 TREML2Q5T2D2 321 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 METRNLQ641Q3 311 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 LAIR1Q6GTX8 287 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 LGI4Q8N135 537 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 OR6F1Q8NGZ6 308 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 OR1P1Q8NH06 330 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 APH1AQ96BI3 265 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 MOAP1Q96BY2 351 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 FLYWCH2Q96CP2 140 aaKnown RBP9.44□□□□□ -0.9
SYNE2-206ENST00000441438 LPAR4Q99677 370 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 SUCNR1Q9BXA5 334 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 FBXO7Q9Y3I1 522 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 HSPB11Q9Y547 144 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 PDE6DO43924 150 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 ORM1P02763 201 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 BCKDHBP21953 392 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 IER3P46695 156 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 OR3A1P47881 315 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 LINC01620Q4KN68 170 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 ZNF620Q6ZNG0 422 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 ZNF761Q86XN6 746 aaPredicted RBP9.44□□□□□ -0.9
SYNE2-206ENST00000441438 RGP1Q92546 391 aaPredicted RBP9.44□□□□□ -0.9
SYNE2-206ENST00000441438 C1QTNF5Q9BXJ0 243 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 DNAJC4Q9NNZ3 241 aa9.44□□□□□ -0.9
SYNE2-206ENST00000441438 MRPL17Q9NRX2 175 aaKnown RBP9.44□□□□□ -0.9
SYNE2-206ENST00000441438 ACOT8O14734 319 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 LYPLA1O75608 230 aaPredicted RBP9.43□□□□□ -0.9
SYNE2-206ENST00000441438 RFPL2O75678 378 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 IFNA17P01571 189 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 DCNP07585 359 aaKnown RBP9.43□□□□□ -0.9
SYNE2-206ENST00000441438 CCL5P13501 91 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 ZNF35P13682 527 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 PSMA1P25786 263 aaKnown RBP9.43□□□□□ -0.9
SYNE2-206ENST00000441438 GAB1Q13480 694 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 AGBL4Q5VU57 503 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 LYSMD4Q5XG99 296 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 ARIH2OSQ8N7S6 290 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 WDR20Q8TBZ3 569 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 FAM45AQ8TCE6 357 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 RBPMSQ93062 196 aaKnown RBP9.43□□□□□ -0.9
SYNE2-206ENST00000441438 PELI1Q96FA3 418 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 PLSCR3Q9NRY6 295 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 MCUBQ9NWR8 336 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 RAXQ9Y2V3 346 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 WDR45Q9Y484 360 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 TGIF2-C20orf24A0A0A6YYL0 155 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 HIDE1A8MVS5 230 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 KRBOX1C9JBD0 128 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 J3QLI3 93 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 ATG12O94817 140 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 HGFP14210 728 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 GDF1P27539 372 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 MON1BQ7L1V2 547 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 SPPL2CQ8IUH8 684 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 UEVLDQ8IX04 471 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 GPD1LQ8N335 351 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 OR4P4Q8NGL7 312 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 TOMM40LQ969M1 308 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 ISOC2Q96AB3 205 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 OR10C1Q96KK4 312 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 FAM96AQ9H5X1 160 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 APOBEC3GQ9HC16 384 aaKnown RBP9.43□□□□□ -0.9
SYNE2-206ENST00000441438 CD320Q9NPF0 282 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 FOXJ2Q9P0K8 574 aa9.43□□□□□ -0.9
SYNE2-206ENST00000441438 METTL1Q9UBP6 276 aaKnown RBP9.43□□□□□ -0.9
SYNE2-206ENST00000441438 LOC105371242A0A075B767 164 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 RNF222A6NCQ9 220 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 FGF16O43320 207 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 CST2P09228 141 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 ABCE1P61221 599 aaKnown RBP9.42□□□□□ -0.9
SYNE2-206ENST00000441438 NFATC2Q13469 925 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 OR1Q1Q15612 314 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 HAGHLQ6PII5 290 aaPredicted RBP9.42□□□□□ -0.9
SYNE2-206ENST00000441438 ENPP7Q6UWV6 458 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 SLC36A1Q7Z2H8 476 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms