RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 LUZP2Q86TE4 346 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 YRDCQ86U90 279 aaKnown RBP4.19□□□□□ -1.74
PTPN4-206ENST00000441089 RNF113BQ8IZP6 322 aaKnown RBP4.19□□□□□ -1.74
PTPN4-206ENST00000441089 GTPBP8Q8N3Z3 284 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-206ENST00000441089 LINC00471Q8N535 108 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 DHRSXQ8N5I4 330 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 IQCF1Q8N6M8 205 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 LRRC75AQ8NAA5 344 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 FAM83FQ8NEG4 500 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-206ENST00000441089 ATP6V1C2Q8NEY4 427 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 OR4Q3Q8NH05 313 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 MBD3L2Q8NHZ7 208 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-206ENST00000441089 FAM216AQ8WUB2 273 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 CYGBQ8WWM9 190 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 TAAR8Q969N4 342 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 BPIFA2Q96DR5 249 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 SGTBQ96EQ0 304 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 ARL5BQ96KC2 179 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 MRGPRX4Q96LA9 322 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 RDH12Q96NR8 316 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 WFIKKN1Q96NZ8 548 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 SFXN3Q9BWM7 321 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 OR2B2Q9GZK3 357 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 PIGMQ9H3S5 423 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 TMEM185BQ9H7F4 350 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 ZNF703Q9H7S9 590 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-206ENST00000441089 CHODLQ9H9P2 273 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 PAPOLBQ9NRJ5 636 aaKnown RBP4.19□□□□□ -1.74
PTPN4-206ENST00000441089 FAM118AQ9NWS6 357 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 UBAP1Q9NZ09 502 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 KIF17Q9P2E2 1029 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 SPRR3Q9UBC9 169 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 AASSQ9UDR5 926 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 SEC14L4Q9UDX3 406 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 CHRNA9Q9UGM1 479 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 DKKL1Q9UK85 242 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 NDRG4Q9ULP0 352 aaKnown RBP4.19□□□□□ -1.74
PTPN4-206ENST00000441089 RAB26Q9ULW5 256 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 SIGLEC7Q9Y286 467 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 POFUT2Q9Y2G5 429 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 BIRC6Q9NR09 4857 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 TRAV36DV7A0A075B6V5 113 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 TRAV27A0A087WT01 109 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 A0A087WZY1 265 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 A0A096LNT2 108 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 LOC100130705A0A1B0GUX0 176 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 A8MVM7 634 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 A8MXE2 369 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 EFCAB9A8MZ26 197 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 ZNF814B7Z6K7 855 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 FTCDNL1E5RQL4 147 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 H0YAE9 185 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 H0YC42 278 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 H3BML4 177 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 ZNF208O43345 1280 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 RAMP1O60894 148 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 IGF2P01344 180 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 HPNP05981 417 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 TSPAN19P0C672 248 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 ASAH2BP0C7U1 165 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 IGHV4-31P0DP07 118 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 PEPDP12955 493 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 ZNF17P17021 662 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 GABRB1P18505 474 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 GSTM3P21266 225 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 MYF6P23409 242 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 CXCR1P25024 350 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 GDF1P27539 372 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 POU1F1P28069 291 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 GGT2P36268 569 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 SRP14P37108 136 aaKnown RBP4.18□□□□□ -1.74
PTPN4-206ENST00000441089 IFNGR2P38484 337 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 RPS19P39019 145 aaKnown RBP4.18□□□□□ -1.74
PTPN4-206ENST00000441089 APOBEC1P41238 236 aaKnown RBP4.18□□□□□ -1.74
PTPN4-206ENST00000441089 HTR3AP46098 478 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 RPS5P46782 204 aaKnown RBP4.18□□□□□ -1.74
PTPN4-206ENST00000441089 HSPA13P48723 471 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 STARP49675 285 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 P2RY4P51582 365 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 AGFG1P52594 562 aaKnown RBP4.18□□□□□ -1.74
PTPN4-206ENST00000441089 RAD23AP54725 363 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 TPD52P55327 224 aaPredicted RBP4.18□□□□□ -1.74
PTPN4-206ENST00000441089 CLDN15P56746 228 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 ESRRGP62508 458 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 CDK5Q00535 292 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 COL10A1Q03692 680 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 CD47Q08722 323 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 COX10Q12887 443 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 SELENBP1Q13228 472 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 PTGES3Q15185 160 aaKnown RBP4.18□□□□□ -1.74
PTPN4-206ENST00000441089 TAF11Q15544 211 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 CTU2Q2VPK5 515 aaKnown RBP4.18□□□□□ -1.74
PTPN4-206ENST00000441089 RFX4Q33E94 735 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 GLYR1Q49A26 553 aaPredicted RBP4.18□□□□□ -1.74
PTPN4-206ENST00000441089 TMEM177Q53S58 311 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 SYT14P1Q58G82 188 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 ZNF691Q5VV52 312 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 C1orf140Q5VVS0 124 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 RAET1LQ5VY80 246 aa4.18□□□□□ -1.74
PTPN4-206ENST00000441089 SLX4IPQ5VYV7 408 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms