RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 F5H0A9 414 aaPredicted RBP7.75□□□□□ -1.17
HPS4-206ENST00000439453 ACTL6AO96019 429 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 NGFRP08138 427 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 MELTFP08582 738 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 HNRNPA2B1P22626 353 aaKnown RBP7.75□□□□□ -1.17
HPS4-206ENST00000439453 PRSS3P35030 304 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 CASRP41180 1078 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 SRSF3P84103 164 aaKnown RBP7.75□□□□□ -1.17
HPS4-206ENST00000439453 PDZK1IP1Q13113 114 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 DCST2Q5T1A1 773 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 LIPNQ5VXI9 398 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 C3orf33Q6P1S2 294 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 ZNF813Q6ZN06 617 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 SLC16A13Q7RTY0 426 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 RAB42Q8N4Z0 105 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 CLEC1AQ8NC01 280 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 OR6S1Q8NH40 331 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 OR5AK2Q8NH90 309 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 DOK4Q8TEW6 326 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 Q96M85 177 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 CNTNAP3BQ96NU0 1288 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 NMNAT3Q96T66 252 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 MRPS30Q9NP92 439 aaKnown RBP7.75□□□□□ -1.17
HPS4-206ENST00000439453 GSN-AS1Q9NRJ2 163 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 ADAM18Q9Y3Q7 739 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 TRAV8-7A0A075B6U6 113 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 A0A0B4J2E0 115 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 A0A1B0GX12 115 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 TMEM200CA6NKL6 621 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 OR2AT4A6NND4 320 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 FAM25EA8MYX2 175 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 MCIDASD6RGH6 385 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 PRAMEF26H0Y7S4 382 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 SULT2B1O00204 365 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 SLC31A1O15431 190 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 FGF16O43320 207 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 FADS1O60427 444 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 RAD1O60671 282 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 NDUFB2O95178 105 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 SLC35G4P0C7Q5 338 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 SPI1P17947 270 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 CD34P28906 385 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 PTGFRP43088 359 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 PNLIPRP2P54317 469 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 SCAND1P57086 179 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 BTN3A2P78410 334 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 ZNF684Q5T5D7 378 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 LIN54Q6MZP7 749 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 GABRG1Q8N1C3 465 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 OR1J2Q8NGS2 313 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 BAHD1Q8TBE0 780 aaPredicted RBP7.74□□□□□ -1.17
HPS4-206ENST00000439453 SEC22AQ96IW7 307 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 EDEM2Q9BV94 578 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 FLRT3Q9NZU0 649 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 TRBV5-5A0A0J9YX44 114 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 A0A1B0GWA3 101 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 CCSO14618 274 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 SMIM6P0DI80 62 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 GIMD1P0DJR0 217 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 CD59P13987 128 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 CD38P28907 300 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 PPM1FP49593 454 aaPredicted RBP7.74□□□□□ -1.17
HPS4-206ENST00000439453 ALKBH1Q13686 389 aaKnown RBP7.74□□□□□ -1.17
HPS4-206ENST00000439453 VWA2Q5GFL6 755 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 LPCAT3Q6P1A2 487 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 PIP4P1Q86T03 277 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 BIVMQ86UB2 503 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 SKA3Q8IX90 412 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 GTPBP8Q8N3Z3 284 aaPredicted RBP7.74□□□□□ -1.17
HPS4-206ENST00000439453 NPEPL1Q8NDH3 523 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 OR4K14Q8NGD5 310 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 OR51D1Q8NGF3 324 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 ZPLD1Q8TCW7 415 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 PAQR8Q8TEZ7 354 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 ARL11Q969Q4 196 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 MNTQ99583 582 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 ZNF251Q9BRH9 671 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 PTDSS2Q9BVG9 487 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 DLL3Q9NYJ7 618 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 GNB5O14775 395 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 WNT11O96014 354 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 HEXAP06865 529 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 OR8G3PP0DMU2 310 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 GPR143P51810 404 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 ATP1B3P54709 279 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 SNRPEP62304 92 aaKnown RBP7.74□□□□□ -1.17
HPS4-206ENST00000439453 PLAURQ03405 335 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 PLEKHN1Q494U1 663 aaPredicted RBP7.74□□□□□ -1.17
HPS4-206ENST00000439453 SLC35D3Q5M8T2 416 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 UNQ6126/PRO20091Q6UXV3 157 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 ZNF600Q6ZNG1 722 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 OR4N5Q8IXE1 308 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 PPP1R1CQ8WVI7 109 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 PTCHD1Q96NR3 888 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 TREM1Q9NP99 234 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 NOP16Q9Y3C1 178 aaKnown RBP7.74□□□□□ -1.17
HPS4-206ENST00000439453 ENTPD2Q9Y5L3 495 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 HS3ST3A1Q9Y663 406 aa7.74□□□□□ -1.17
HPS4-206ENST00000439453 KNL1Q8NG31 2342 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 CFAP47Q6ZTR5 3102 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms