RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 DECR2Q9NUI1 292 aa15.78■□□□□ 0.12
AC004540.1-201ENST00000439120 CMTM6Q9NX76 183 aa15.78■□□□□ 0.12
AC004540.1-201ENST00000439120 UGT2A1Q9Y4X1 527 aa15.78■□□□□ 0.12
AC004540.1-201ENST00000439120 TRAV27A0A087WT01 109 aa15.77■□□□□ 0.12
AC004540.1-201ENST00000439120 A0A1W2PPL8 197 aa15.77■□□□□ 0.12
AC004540.1-201ENST00000439120 CXCR6O00574 342 aa15.77■□□□□ 0.12
AC004540.1-201ENST00000439120 IGHMP01871 453 aa15.77■□□□□ 0.12
AC004540.1-201ENST00000439120 PCBD1P61457 104 aa15.77■□□□□ 0.12
AC004540.1-201ENST00000439120 ZNF718Q3SXZ3 478 aa15.77■□□□□ 0.12
AC004540.1-201ENST00000439120 ANKDD1AQ495B1 522 aa15.77■□□□□ 0.12
AC004540.1-201ENST00000439120 IFI44LQ53G44 452 aa15.77■□□□□ 0.12
AC004540.1-201ENST00000439120 FAM27BQ5VT28 67 aa15.77■□□□□ 0.12
AC004540.1-201ENST00000439120 SLC25A47Q6Q0C1 308 aa15.77■□□□□ 0.12
AC004540.1-201ENST00000439120 RRM2BQ7LG56 351 aa15.77■□□□□ 0.12
AC004540.1-201ENST00000439120 CPEB3Q8NE35 698 aaKnown RBP15.77■□□□□ 0.12
AC004540.1-201ENST00000439120 AKR7LQ8NHP1 331 aa15.77■□□□□ 0.12
AC004540.1-201ENST00000439120 NABP1Q96AH0 204 aa15.77■□□□□ 0.12
AC004540.1-201ENST00000439120 NMD3Q96D46 503 aaKnown RBP15.77■□□□□ 0.12
AC004540.1-201ENST00000439120 C19orf24Q9BVV8 132 aa15.77■□□□□ 0.12
AC004540.1-201ENST00000439120 CCDC134Q9H6E4 229 aa15.77■□□□□ 0.12
AC004540.1-201ENST00000439120 LPAR2Q9HBW0 351 aa15.77■□□□□ 0.12
AC004540.1-201ENST00000439120 TREM2Q9NZC2 230 aa15.77■□□□□ 0.12
AC004540.1-201ENST00000439120 FBN3Q75N90 2809 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 IGKV1D-43A0A0B4J1Z2 117 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 PLSCR5A0PG75 271 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 J3KTA2 159 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 TCF21O43680 179 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 CCDC22O60826 627 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 COX4I1P13073 169 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 MAKP20794 623 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 LAP3P28838 519 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 RPL4P36578 427 aaKnown RBP15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 SLC9A3P48764 834 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 SLC7A2P52569 658 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 SRSF2Q01130 221 aaKnown RBP15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 PRKCDQ05655 676 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 SPATA46Q5T0L3 261 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 CYP4Z1Q86W10 505 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 MEX3DQ86XN8 651 aaKnown RBP15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 SLC15A3Q8IY34 581 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 RNF113BQ8IZP6 322 aaKnown RBP15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 RFLNBQ8N5W9 214 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 OR51F2Q8NH61 342 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 ACOT11Q8WXI4 607 aaPredicted RBP15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 HOPXQ9BPY8 73 aaPredicted RBP15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 EFCAB1Q9HAE3 211 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 SAP30LQ9HAJ7 183 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 NKIRAS2Q9NYR9 191 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 GRIP1Q9Y3R0 1128 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 SNX13Q9Y5W8 968 aa15.76■□□□□ 0.11
AC004540.1-201ENST00000439120 IGHV1-69-2A0A0G2JMI3 117 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 NDUFAB1O14561 156 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 RP2O75695 350 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 SERPINA1P01009 418 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 IGHV3-13P01766 116 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 MSMBP08118 114 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 CST2P09228 141 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 GAAP10253 952 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 ZNF81P51508 661 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 PSG4Q00888 419 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 TSTQ16762 297 aaKnown RBP15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 SHQ1Q6PI26 577 aaKnown RBP15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 C1orf174Q8IYL3 243 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 CLDN22Q8N7P3 220 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 OR13C2Q8NGS9 318 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 FAM162AQ96A26 154 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 TMEM186Q96B77 213 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 HSH2DQ96JZ2 352 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 POM121L2Q96KW2 1035 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 OR2H1Q9GZK4 316 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 RACGAP1Q9H0H5 632 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 HIF1ANQ9NWT6 349 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 GMPR2Q9P2T1 348 aaKnown RBP15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 GRHPRQ9UBQ7 328 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 TIMM10BQ9Y5J6 103 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 STAB1Q9NY15 2570 aa15.75■□□□□ 0.11
AC004540.1-201ENST00000439120 C12orf71A8MTZ7 269 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 FAM157AC9JC47 383 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 NME4O00746 187 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 XKRYO14609 159 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 WNT9BO14905 357 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 ANPEPP15144 967 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 CRYBB2P43320 205 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 GPR4P46093 362 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 NUDT2P50583 147 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 ARHGDIAP52565 204 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 MVKQ03426 396 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 HFEQ30201 348 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 AVPI1Q5T686 147 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 ARL9Q6T311 187 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 MBOAT2Q6ZWT7 520 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 USP51Q70EK9 711 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 CBLL1Q75N03 491 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 ZNF101Q8IZC7 436 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 ABHD4Q8TB40 342 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 SLC25A40Q8TBP6 338 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 TIMD4Q96H15 378 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 LRRC37BQ96QE4 947 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 MAN2C1Q9NTJ4 1040 aa15.74■□□□□ 0.11
AC004540.1-201ENST00000439120 ZNF446Q9NWS9 450 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms